Ctenopharyngodon idella (grass carp): 127511116
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Entry
127511116 CDS
T08802
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127511116
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127511116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
DUF5446
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
127511116
NCBI-ProteinID:
XP_051747633
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Position
4:24417728..24439576
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AA seq
562 aa
AA seq
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MAEARFSQDEFLCPVCLDLLKDPVAIPCGHSYCKSCITGCWDQEDQMRVYSCPQCRQTFS
PRPALAKNTMLAEVVEKLKKIPADCYAGAGDVQCDVCTGRKHKAVKSCLVCLNSYCQNHL
DQHESWFKGKRHNLTDATGRLQEMICQKHDKILEVFCRTDQECICVLCIIDEHKNHNTVS
AAAQRTEKQHQLKETQRSFQQKIQQREKDLQQLREAVESHKRSAQTAVEDSERIFTELIR
SIERSRSEATQRIRDQEKTAVSRAEGRLERLEQEINDLRRRDAELEQLSHTQDHIHFLQS
FQSLSAPPESTDVNDDPFSSLSSFDVVRESVRRLKDKLEDFCKEELKKISDRVTFTNIVP
RTRNDFLQYSHQFTLDLNTVNKLLRLSERNRVITGTFTKQLYPDHPDRFDVCRQVLCRES
VCGRCYWEIEWSGGVSISVSYKSISRKGRRYECLFGYNDQSWSLICTPSSYSFRHNNIKT
EVPVKPIIISGIEMDEDYLETDLTVEPIISRIGVYVDHSAGTLSFYSVSGDTMILIHTVQ
TTFTQPLYPGFSVYYKSSVKLC
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagattttctcaggatgagttcctgtgtccagtgtgtctggatctcctg
aaggatccagtggccattccctgtggacacagttactgtaagagctgtattacaggctgc
tgggatcaggaggatcagatgagagtctacagctgtcctcagtgcagacagaccttcagt
ccaagacctgctttagctaaaaacaccatgctggctgaagtggtggagaaactgaagaag
attcctgctgactgttacgctggagctggagatgtgcagtgtgacgtctgtactggaaga
aaacacaaagccgtcaagtcctgtctggtgtgtctgaactcttactgtcagaatcacctt
gatcaacatgagagttggtttaaaggaaagagacacaatctgactgatgccactggacga
ctgcaggagatgatctgccagaaacacgacaagatccttgaggttttctgccgcactgat
caggagtgtatatgtgtgctgtgtataatagatgaacataaaaaccacaacactgtatca
gctgcagcacagaggacagagaaacagcaccagctgaaggagacgcagaggtcgttccag
cagaagatccagcagagagagaaagatcttcagcagctgagagaggctgtggagtctcat
aagcgctctgcacagacagcagtggaggacagtgagaggatcttcactgagctcatccgc
tccattgagagaagccgctctgaggccacacagcggatcagagatcaggaaaagactgca
gtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgatctgaggagg
agagacgctgagctggagcagctttcacacacacaggatcacatccatttcctgcagagt
ttccagtctctctcagctcctcctgaatctacagacgtaaatgacgatcccttcagttct
ctctcctcttttgatgttgtgagagaatctgtccgtcggctgaaagacaaactggaggat
ttctgcaaagaggagctcaagaagatctctgacagagtcactttcaccaacattgttccc
aggaccaggaacgacttcctacaatattcccatcagttcactctggatctgaacacagtg
aataaactcctccgtctgtctgagaggaacagagtgattactggcactttcacaaagcag
ttgtatcctgatcatccagacagatttgatgtgtgtcgtcaggtgttgtgtagagagagt
gtgtgtggacgctgttactgggagattgagtggagtggtggtgtgtctatatcagtgtca
tataagagcatcagcaggaagggacggcgttatgagtgtttgtttggatataatgatcag
tcctggagtttgatctgcactccctccagttactcattcagacacaataacataaagact
gaagtccctgtaaagcccatcatcatcagtggaatagaaatggatgaagattatttagag
actgatctcactgtagagcccatcatcagtagaataggagtgtatgtggatcacagtgca
ggaactctgtccttctacagcgtctctggagacacaatgatcctcatccacacagtccag
accacattcactcaaccgctctatcctgggtttagtgtttattataaatcatcagtgaaa
ctgtgctga
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integrated database retrieval system
