Ctenopharyngodon idella (grass carp): 127511117
Help
Entry
127511117 CDS
T08802
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127511117
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127511117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_5
DUF4618
zf-RING_6
Prok-RING_4
DUF5446
DUF3829
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
127511117
NCBI-ProteinID:
XP_051747637
LinkDB
All DBs
Position
4:complement(22608312..22668735)
Genome browser
AA seq
559 aa
AA seq
DB search
MAEARFSQDEFMCSVCLDLLKDPVAIPCGHSYCKICITGCWDQEDQKRVYSCPQCRQTFS
PRPALAKNTILAELVEKLKKIKLPADCYAGAGDVQCDVCTGRKHKAVKSCLVCLNSYCQN
HLEQHESFFKGKRHNLTEATGRLQEMICQKHDKILKFFCCTDQECICVLCTMDEHKNHDT
VSAAAQRTEKQHQLKETQRWFQQRIQQREKDLQQLREAVESHKHSAQTAVEDSERIFTEL
IRSIERSRSEATQRIRDQEKTAVSRAEGRLKRLEQEINDLRRRDAELEQLSHTQDHIHFL
QSFQSLSAPPKSTDVNDDPFSSLSSFDVVRESVRQLRDKLEDFCKEELKKISDRVTFTNF
VPRTRNDFLQYSHQLTLDPNTVNKRLHLSERNRVITGTGIFTVQPYPDHPDRFDGYNLQV
LCRESVCGRCYWEIEWSGNNIFGVCISVSYKSISRKGRGKECWFGCNDQSWSLFCSSSRY
SFKHNNIDTKLPVESISSRIGVYVDHSAGTLSFYSVSGDTMSLIHTVQTTFTQLLYPGFW
VGLNNNIIIDCRENLPIML
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagattttctcaggatgagttcatgtgttcagtgtgtctggatctcctg
aaggatccagtggccattccctgtggacacagttactgtaagatctgtattacaggctgc
tgggatcaggaggatcagaagagagtctacagctgtcctcagtgcagacagaccttcagt
ccaagacctgctttagctaaaaacaccattctggctgaactggtggagaaactgaagaag
attaaacttcctgctgactgttacgctggagctggagatgtgcagtgtgacgtctgtact
ggaagaaaacacaaagccgtcaagtcctgtctggtgtgtctgaactcttactgtcagaat
caccttgaacaacatgagagtttctttaaaggaaagagacacaatctgactgaagccact
ggacgactgcaggagatgatctgccagaaacacgacaagatccttaagtttttttgctgc
actgatcaggagtgtatatgtgtgctgtgtacgatggatgaacataaaaaccacgacact
gtatcagctgcagcacagaggacagagaaacagcaccagctgaaggagacgcagaggtgg
ttccagcagaggatccagcagagagagaaagatcttcagcagctgagagaggctgtggag
tctcataagcactctgcacagacagcagtggaggacagtgagaggatcttcactgagctc
atccgctccattgagagaagccgctctgaggccacacagcggatcagagatcaggaaaag
actgcagtgagtcgagctgaaggacgactgaagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacaggatcacatccatttcctg
cagagtttccagtctctctcagctcctcctaaatctacagacgtaaatgacgatcccttc
agttctctctcctcttttgatgttgtgagagaatctgtccgtcagctgagagacaaactg
gaggatttctgcaaagaggagctgaagaagatctctgacagagtcactttcaccaacttt
gttcccagaaccaggaacgacttcctacaatattcccatcagctcactctggatccgaac
acagtgaataaacgcctccatctgtctgagaggaacagagtgattactggcactggcatt
ttcacagtccagccgtatcctgatcatccagacagatttgatggatataatcttcaggtg
ttgtgtagagagagtgtgtgtggacgctgttactgggagattgagtggagtgggaataat
atatttggtgtgtgtatatcagtgtcatataagagcatcagcaggaagggacggggtaaa
gagtgttggtttggatgtaatgatcagtcctggagtttgttctgctcttcctccagatac
tcattcaaacacaataacatagatactaaactcccagtagagtccatcagcagtagaata
ggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctggagacaca
atgagcctcatccacacagtccagaccacattcactcaactgctgtatcctgggttttgg
gttggtcttaataataatataataatagactgtagagagaatctacccataatgctttga
DBGET
integrated database retrieval system
