Ctenopharyngodon idella (grass carp): 127511139
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Entry
127511139 CDS
T08802
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127511139
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127511139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_10
Prok-RING_4
V_ATPase_I
DUF4407
Motif
Other DBs
NCBI-GeneID:
127511139
NCBI-ProteinID:
XP_051747710
LinkDB
All DBs
Position
4:complement(22648206..22684087)
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AA seq
543 aa
AA seq
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MAEARISQDEFMCSVCLDLLKDPVAIPCGHSYCKICITGCWDQEDQMRVYSCPQCRQTFS
PRPALAKNTILAELVEKLKKIKLPADCYAGAGDVQCDVCTGRKHKAVKSCLVCLESYCQT
HFDRHEEFHSRKPHKVTEATGRLQEMICTKHDKIFEVFCRTDQKCICVLCMNEHKNHDTV
SAAAQRTEKQHQLKETQRSFQQRIQQREKDLQQLREAVESHKRSAQTAVEDSERIFTELI
CSIERSCSEATQRIRDQEKTAVSRAEGRLERLEQEINDLRRRDAELEQLSHTKDHIHFLQ
SFQSLSAPPESTDVNDDPFSSLCSFDVVRESVRQLRDKLEDFCKEELKKISDRVTFTNIV
PRTRNDFLQYSHQLTLDLNTVNKHLRLSEGNRVITGTDTVQLYPDHPDRFDYPQVLCRES
VCGRCYWEIERSGKYVFISVSYKSISRKGSGKECLFGCNDQSWSLFCSSSSYLFYHNNIV
TKLPVKSIFISRIGVYVDHSAGTLSFYSVSGDTMSLIHTVQTTFTQPLYPGFMLGYKSSV
KLC
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagaatttctcaggatgagttcatgtgttcagtgtgtctggatctcctg
aaggatccagtggccattccctgtggacacagttactgtaagatctgtattacaggctgc
tgggatcaggaggatcagatgagagtctacagctgccctcagtgcagacagaccttcagt
ccaagacctgctttagctaaaaacaccattctggctgaactggtggagaaactgaagaag
attaaacttcctgctgactgttacgctggagctggagatgtgcagtgtgacgtctgtact
ggaagaaaacacaaagccgtcaagtcctgtctggtgtgtctggagtcttactgtcaaact
cattttgaccgtcatgaggaatttcactcacgtaagccacataaagtgactgaagccact
ggacgactgcaggagatgatctgcacgaaacacgacaagatctttgaggttttctgccgc
actgatcagaagtgtatatgtgtgctgtgtatgaatgaacataaaaaccacgacactgta
tcagctgcagcacagaggacagagaaacagcaccagctgaaggagacgcagaggtcgttc
cagcagaggatccagcagagagagaaagatcttcaacagctgagagaggctgtggagtct
cataagcgctctgcacagacagcagtggaggacagtgagaggatcttcactgagctcatc
tgctccattgagagaagctgctctgaggccacacagcggatcagagatcaggaaaagact
gcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgatctgagg
aggagagacgctgagctggagcagctttcacacacaaaggatcacatccatttcttgcag
agtttccagtctctctcagctcctcctgagtctacagacgtaaatgacgatcccttcagt
tctctctgctcttttgatgttgtgagagaatctgtccgtcagctgagagacaaactggag
gatttctgcaaagaggagctgaagaagatctctgacagagtcactttcaccaacattgtt
cccagaaccaggaacgacttcctacaatattcccatcagctcactctggatctgaacaca
gtgaataaacacctccgtctctctgaggggaacagagtgattactggcactgacacagtc
cagctgtatcctgatcatccagacagatttgattatcctcaggtgttgtgtagagagagt
gtgtgtggacgctgttactgggagattgagaggagtgggaaatatgtgtttatatcagtg
tcatataagagcatcagcaggaagggatcaggtaaagagtgtttgtttggatgtaatgat
cagtcctggagtttgttctgctcttcctccagttacttattctatcacaataacatagtg
actaaactcccagtaaagtccatcttcatcagtagaataggagtgtatgtggatcacagt
gcaggaactctgtccttctacagcgtctctggagacacaatgagcctcatccacacagtc
cagaccacattcactcaaccgctctatcctgggtttatgcttggttataaatcatcagtg
aaactgtgttga
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