Ctenopharyngodon idella (grass carp): 127512993
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Entry
127512993 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM32-like
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127512993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127512993
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127512993
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127512993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
zf-RING_4
Baculo_IE-1
GIY_YIG_2
zf-tcix
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
127512993
NCBI-ProteinID:
XP_051750374
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All DBs
Position
5:685540..693848
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AA seq
659 aa
AA seq
DB search
MATPTSLDPDLVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSCGSTMGLMCKSCKNRLPRQYCRDCSIVLCDI
CKTEGHQRQGHVVQAIRVAAEQCRKDISGKLSNLREAMGNIQKKKTAIDNVTKSLRLKYK
AVQQEYAKAELRLQEELGRSRRAFATSLAEIEKLNAQILEEQTYLLNIAEVQVVSRCDYL
TMRIKQTDIALLEEGSNNEEEELEIKTNLPIVLKLQDPELVKMECATPLNVAQLTTKPCT
VNAEEEDGLDFAAAAPLDIYRDIDMVTAVEEAVCASPGSFKSKSVDGGGPPPGASGGQLC
QFVKKMGCKGNLPGMFNLPVSICVTPQGEVLVADRGNYRIQIFNRKGFQREIRRNPSSID
NFVLSFLGADLPNLIPLSIAITAQGLIGVTDNYDNSVKVYTTDGHCIACHKNQLIKPWGI
AAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFVTCDSSGTVYFTQGLGL
NIENRHNEHHLEGGFSIGSVGMDGQLGKQLSHFFSENEDFRCITGMCVDTNGDLIVTDSG
RKEILQFPKEGGFNVLIQEGLTCPVGVAVTQKGQLLVLDCWDHCVKVYTYLQKRRSSTC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccaacgtccctagacccagatttggtccgggaggtgctggaatgccccatt
tgcctggagacctacaaccaggatcagcttcgacccaagctgctgcagtgtggtcactct
gtgtgtcgccagtgccttgagaaactcctcgccagcacgataaatggcgtgcgctgcccc
ttctgcagcaaggtgtctcgtatgagcagtatttcccagctggctgacaatctcactgtt
ttgaagatcattgactgtgcaagttcatgcggttccaccatgggcctcatgtgcaagtct
tgtaaaaaccgcctgccccgtcaatactgccgtgactgcagcattgtgttgtgtgatatt
tgtaaaaccgaggggcaccagcgtcagggccatgtagtacaggccattcgcgtagctgcc
gaacagtgccggaaagacatcagcggaaagctttctaacttgcgggaggcaatgggcaac
attcagaaaaagaagaccgctatcgacaacgtgacaaaatcactcagactgaagtacaag
gctgtgcagcaggagtatgccaaggctgagttgcggctccaagaggaactggggcgttcc
cgccgtgcctttgccacctccttggccgaaatagagaagctcaatgcccagattctagag
gagcagacgtacctgctcaacatcgctgaagtgcaggtggtgtcaagatgtgactaccta
accatgaggatcaagcaaactgatattgctctactagaggaagggagtaacaatgaagaa
gaggagctggagataaaaaccaatctgcctatcgttctgaaactacaagaccctgaactg
gttaaaatggagtgtgcaacacccttaaacgtggcacaactgaccacaaaaccctgcact
gtcaatgccgaagaggaagatggactcgatttcgccgctgccgcccctttggacatttat
cgtgatatcgacatggtgacggcggttgaagaggctgtttgcgcttctcccggtagcttc
aagtccaagtctgtagatggaggaggacctcctccaggggcttctggtgggcagctctgt
cagttcgtgaaaaagatgggatgcaagggcaatctgccaggcatgttcaacttgcctgta
agcatttgtgtcacgccgcagggtgaggttctcgtggccgaccgagggaactaccgcatc
cagatcttcaaccgcaagggcttccaaagggagatacgccgcaacccgagcagcatcgac
aacttcgtcttgagcttcctcggtgccgacctgcccaacctcatccctctctccattgca
atcactgctcagggcctcatcggtgtcactgataactacgacaactctgtgaaggtttac
accaccgatggccactgcatcgcctgccacaagaaccagctcatcaagccgtggggaatt
gcggccatgccttcggggcagtttgtcgtgtcagatgtcgagggggggaagctgtggtgc
ctggctgtggatcgtaacgtaggggtagtgaactataaccgattgtgctcggccgtcagg
cccaaatttgtaacttgcgactcctcaggtacagtctacttcacacagggcttgggtctg
aatatcgagaatagacacaatgagcaccacctcgaaggggggttttccatcggctcggtg
gggatggatgggcagctgggaaagcaactcagtcacttcttctcagagaacgaggacttc
cgatgcatcaccggcatgtgtgtggacactaacggggacttgatcgtaacagacagtggc
cgtaaggagatactgcagttccccaaagagggtggcttcaacgttctcattcaggagggc
cttacgtgccctgtaggagtagctgttacccagaagggacaactgcttgtcttagattgc
tgggaccactgtgtgaaggtttacacatatttgcaaaagagacgttcctctacgtgttaa
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