Ctenopharyngodon idella (grass carp): 127513833
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Entry
127513833 CDS
T08802
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127513833
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127513833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Adeno_PIX
Motif
Other DBs
NCBI-GeneID:
127513833
NCBI-ProteinID:
XP_051751879
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All DBs
Position
6:complement(12298975..12334565)
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AA seq
422 aa
AA seq
DB search
MLMSTDVASVMLPVSRGILERERDLDSGSAAVRGMKRGDPEPEGAAAAGDSVGAECKRAR
MDGTGEIGQGSQDTMGAQEGVVTPFSSFPPPPPPPPQNGLALEFGGGSIYPAGGQTEAPA
GVSNTSSSNPSTQLSDGSPQAEGQCVSAGGSGSEESSEAKGTPKRLHVSNIPFRFRDPDL
RQMFGQFGKILDVEIIFNERGSKGFGFVTFETSADAEKARERLHGTIVEGRKIEVNNATA
RVMTNKKLVSPYANGEGLSTLPYAGWKLSPMMGAMYGPELYAVPGFPYPTAASAAAASAA
ATFRGAHHLRGRGRPVYGAVRAAVPQPTIQAYPGVVYQDGFYGATELYSGYTAYRYTQPA
AVASPTAAAAAAAAAYSDSYGRVYAADPYAAALAAAPAAAAAYGVGAMATLYRGGYSRFS
PY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatctgtaatgctgcccgtgagccgcgggatcctggag
cgcgagagggatctggactcgggttcggcggcggttcgggggatgaagcgcggggacccg
gagccggagggcgcagcagcggcgggggattctgtcggtgctgagtgcaaacgagcgcgg
atggacggtaccggagagatcggacagggttcacaggacacgatgggagctcaggagggc
gtcgtcactccgttctcctccttccctcccccgccgcctcctccccctcagaacggcctg
gcgctggagtttggggggggcagtatttaccccgcaggggggcagaccgaggccccggca
ggagtcagcaacacctcctcctctaaccccagcactcaactgtcagatgggtctcctcag
gcagaaggtcagtgtgtttctgccggcggttcgggcagtgaagagtcctcagaggccaaa
ggaaccccgaaacggctccatgtttccaacatccccttccgcttcagagacccagacctg
cggcagatgttcgggcaatttggaaagattcttgatgtggagataattttcaatgagcgg
ggctcaaagggttttggttttgtgacgtttgagaccagtgcagatgcagagaaagcgcga
gaacgtctccacgggaccatcgtggagggacgaaagatcgaggtcaataacgctacagct
cgagtgatgaccaataagaagttggttagcccgtatgctaacggagaaggtctcagcacg
ctgccctacgctgggtggaaattgagtcccatgatgggcgcgatgtacggaccggagctc
tatgcagttccagggtttccgtatcctactgccgcctccgcagctgccgcttctgccgca
gcaaccttcagaggagctcatcatctgcggggtcgcggccggccggtctatggagccgtg
cgcgccgctgttcctcagcccaccatacaggcctatcccggtgtggtgtaccaggatggg
ttttatggagctacagaactgtatagcggctatactgcgtatcgctacacccagccggcg
gccgtagcgagtccaacggcagcggcggcggcagcggcggccgcctacagtgacagctac
ggtcgcgtgtacgcggcagatccgtacgcggctgcattagcggcagctccggcggcggca
gcggcgtatggagtcggagcgatggccactctctacagaggaggatacagccggttttcg
ccatattaa
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