Ctenopharyngodon idella (grass carp): 127513871
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Entry
127513871 CDS
T08802
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127513871
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127513871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
CHDCT2
DEAD
HDA2-3
O_Spanin_T7
Motif
Other DBs
NCBI-GeneID:
127513871
NCBI-ProteinID:
XP_051751943
LinkDB
All DBs
Position
6:complement(30363614..30409174)
Genome browser
AA seq
2969 aa
AA seq
DB search
MSGAGVSRRRHKDQETMKIQKKDKQMSAAHVLKHTPSAAASNVSDQNAQTTFPIGHLGKE
QLRIIGGPPNHCMAHTKAGSAASGHSLRPSSINSEEDDGGGGTRVKKKRRKKDKKESEWN
KDGESNAKPKRREQKEGKELLPRKSKAVKEQKDHKREAKGQKEVKKVKKGQDVKVKSQPK
NTATHPPSKRGRKPKEQGAMPPEKKKKGKRKSDAVLEMVESDDTASLCTLATGGEESTDP
MDNTKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRIAAMSSSTLAWQAEEPPEDE
ANIIEKILSVRTVKKETSPDEPPEELEEFYVKYRNFSYLHCKWATLEELEKDPRIHQKIK
RFRNKQAQMKHIFTEPDEDLFNPDYIEVDRVLEIAITTDTETGEEVTHYLVKWCSLSYEE
STWELQEDVDPVKIREFEDLKKIPEIKQVERPLPEQWQKLEKSREYRNGNQLREYQLEGM
NWLLFNWYNRKNCILADEMGLGKTIQSITFLFEIFLMGLRGPFLIIAPLSTITNWEREFR
TWTEMNVIVYHGSQISRQMIMQYETYYRDEQGNILSGQFKFHGVITTFEMIMADCPELKK
INWRCVVIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPSQF
PSETTFLEEFGDLKTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKK
YYRAILEKNFAFLAKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFKKTYSSD
AVDFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERI
DGRVRGNLRQAAIDRFSKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA
QARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSK
MEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSS
GNRTDISLDDPNFWQKWAKIAELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDELMEFS
ELDSDSEERPCRTRRLSDRNRRYLRAECFRVEKNLLIFGWGRWKDILNHGRFKWHLSERD
MEVLCRALLVYCVRHYKGDDKIKSFIWDLITPTKDGHNQALQNHSGLSAPVPRGRKGKKL
KNQLSPPELKSADWLVHCNPEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKVEVLGEAAD
QALEGIPASKLEVTLPDIDYIEIPTIWWDAEADKSLLIGVHKHGYERYNAMRADPALCFL
ERVGMPDVTSLTVEQGGAETASDAPDSISKSDEIKEENDMKSEELEEKVEIKEEPMSEET
GKNDTTVTGGFVASLAGDLITEMMEQGRIQWPAGSALTARLRRLITAYQRYTRREPLRHD
FLLHDGIAPVAWQIGEFRHCTTEPDPLFLEWQRRWTRREQADFYRTVSSFGVVYDPEKKT
FDWGQFRALARLERKTDESLERYFHSFVSMCRTACRLPPRKDEGTVDSSLLVEPITEERA
ARTLYRIELLRKVREQVLRHPLLGSRLQLCRPSLYLPVWWECGKHDRDLLIGVAKHGLSR
TDFYILNDPQLSFLEAHRNYVHKENHRYPVPGLPHHHCCLYDANLGHCQSPQPLEYHHTH
SPHTPTQLVHTHGHHQPTEVVASEPGSSLGIGTGNRDGFLDCPPLDDSLELGSLQHEGLT
SDTLHSKSGKEAFNGFPFNSATGGQNMLNSYGVQGELNGAQGDMADSIAGKLRSDVLVGE
QGSSEETGLMAPSVELDELQTPWESSDHVETSDMFNETDPILGAQALEPSFLDAPQPDDG
REGDETLTDCLSMPSSDSQSNPVEPLAPSFMLFKDLNVGETSVDQTDLSASLPEFVPPPL
GLPDVSLDQADPISEDQEDKLSDSNITHGVPSPGEGAESIGFHFEKEDLSPDSSKTKDSQ
DEIDKMPSIESPRENCLEESQKGDCKVTFDDSNEGDLKDPCEVALEESYVKPLREPEKVP
LEESYDLTCDETLQEPCEGFQQDAAEQHLVEEPSEESCKELSEPIEECNLTNTTLSTDYP
LPSSLPSSPTTLPDTSVSPVLDAVPKQEFLMDPVVSDVKPEPDSTTQTPHLEQTEVLDVK
DKIKDEGAKTPALLGDVDAPRFALPMCEMADNVHEIREPTIAQLLQEKALFSFSEWPKDR
VIINRIDSICHTILKGKWPSSSQQYESPTALANTCMPSSAHQRAGFLPTRMPISQSLNFN
LTHTVPHLPKERLVAPAFLPELKRPRRGFEFEAEVLAKPSHLGEKIQVGVPHRANTLLLN
GWQDTAIDLSKPTELTVGGDSGPISHMSHTVQSAPHKITGIGSIQGSLGLDMAGILQAGL
IHPVTGQIVNGSLRRDDSMLRRRRGRRRNVETPDLGFMKGRAMNLPEQQCGSESISQPVV
SSTSSQSECPPSTPTTLPTHPPASSPAPPPASEALNVSVDRETANKGLMEWLRQNPNYNM
ELSAFPSSQNVSMLHSFLERPKQRRHRCKDPTKLDVSSLTGEERVPVVHRNTGRRLGGAM
APAIKELSRWLDANSEYSVAPDWADVVKHSGFLPEGKFTRILTGPVCRDPGPRRRGRRPR
SEMPKAPELPSGMGPLFMNGGLISSMDLVSLPSLRNVPGIPLTGIMGFPHGFAAAVSSGD
DAKNGLGMLPMMLHGMAAVQPPMYSAHMSGMMSQSLSTATSTTSTATASSTTASVTSTNS
ATVTSTSSPADSSDTVPQRDNASSPMSTENWNKEDAKQGGEEKKVSASVSTAAATSNSSS
SSITSTGSHLTFNPFLIPGMSHSLLYPHMFLPPGSIMALPAMPAADSTGSPKRKRKKVRE
EGPVEGSGNVGVQMDGEESKGVKVEQTPERKSQEGGMEEDGHDVNLALVKDPSDHIKDPS
EDKSTEEKEKNEMGEEPEQDAQGPCDGGD
NT seq
8910 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagccggcgtgtccagacgcagacacaaagatcaagaaacaatgaaaatacaa
aagaaggacaagcagatgtctgccgcccatgtactaaagcacactccatccgctgctgcc
tcgaatgtctctgaccaaaacgcacaaactacatttcccatcggccacttgggcaaagaa
cagttacggattatcggagggccgcccaatcattgcatggctcacacaaaggcagggtct
gctgccagcggtcacagtctccgcccttcatcaatcaacagtgaggaggatgatggaggg
ggtgggactagggtgaagaagaaacgaaggaaaaaagacaagaaagagtccgagtggaac
aaagatggagagagcaatgctaaaccaaagagaagggagcaaaaggaagggaaggagctt
cttccaagaaagtcaaaggcggtgaaggaacaaaaggatcataagagggaggcgaaaggt
caaaaggaggtcaaaaaggtcaagaaaggtcaagatgtgaaagtgaaatcacagcccaag
aacactgcaacacatccaccctccaaaagagggaggaagccaaaagagcagggtgccatg
cctccggagaagaagaagaagggaaagaggaaaagtgatgctgtacttgagatggtggag
agtgatgacacagcctctctctgcacgctcgccaccggcggtgaggaaagcaccgaccct
atggataacactaagaggcgatcagggcgtcaagtgaaacggcggaagtacaacgaagat
cttgatttcaaggtcgtggatgatgacggggagaccattgctgttttgggcgcgggccga
attgccgccatgtcttcctctacccttgcctggcaggccgaggaaccccctgaagatgag
gctaatattattgagaaaatactttcagtgcgaacggtcaagaaagagacatcccctgat
gaaccaccagaagagttggaggagttttacgtcaagtacagaaatttctcctatctgcac
tgtaaatgggcgaccttggaggaactggagaaggacccacgcatacaccaaaaaatcaag
cgcttcagaaacaagcaggcacaaatgaagcacattttcacagagccggatgaagacctt
tttaatccagattatattgaggttgatcgggttttagagatcgctatcaccaccgataca
gaaacaggagaggaagttacacactacctggtgaaatggtgctctttgtcatatgaggag
agtacttgggagctacaggaagatgttgaccctgtgaaaatccgagagtttgaagacctc
aagaaaattccagaaattaaacaggtggaaaggcctctgccagaacagtggcaaaaactg
gagaagtccagagaatacaggaatgggaaccagctccgagaataccagttagagggaatg
aactggcttcttttcaactggtacaacaggaaaaactgtattctggctgatgagatgggg
ctggggaagaccatccagtccatcacgttcctctttgagattttcctcatgggtctgaga
ggacctttcctcatcatcgccccactctccaccatcaccaactgggagagagaattccgc
acatggactgaaatgaatgtcattgtctatcacggcagccaaatcagtcggcagatgatc
atgcagtatgagacgtactaccgagatgaacagggaaacatcctgtctggtcagtttaag
tttcatggcgtgatcactacatttgaaatgataatggctgactgtccagagctgaagaag
attaactggcgctgtgtggtgattgacgaggcccatcgcctaaaaaaccgcaactgtaaa
ctgctggaggggctcaaactcatgaacctggaacataaagtccttctcacaggaacccct
ttgcagaactcagttgaggaactctttagtctgcttaactttctcgagccctcacagttc
ccttccgagactacattcctggaggagttcggagacctaaagacggaggagcaggtaaag
aaactgcaagccattctgaagcccatgatgttgaggagactgaaggatgatgtggagaag
aatctggcccctaaagaagagacaatcatcgaggtggagctcactaacattcaaaagaaa
tactaccgcgccattctggagaaaaactttgccttccttgccaagggagcgaaccagcac
aacatgcccaacctcatcaacacaatgatggagcttcgcaaatgctgcaatcacccatac
ctcattacaggcgctgaagaaaagattcttgagagcttcaagaaaacctacagttctgac
gctgtggattttcagctgcaggcaatgatccaggccgctggtaaactagtgcttatcgac
aagttgctgcccaaactgctggccggaggacataaagtgctggtgttttcccagatggtt
cgatgccttgatatactggaggactacctcattcagaggaggtatacatacgaacggatt
gatgggagagttcgagggaatctacggcaggctgccatcgatcgcttcagtaaggtggac
tccgaccgattcgtgttcctcctctgtacacgagcaggaggtctaggcatcaaccttacc
gctgccgacacctgtataattttcgactcagactggaacccacagaacgacttgcaggct
caagctcgctgccaccggatcggtcaaagcaaagcggtgaaagtgtatcgacttatcaca
cgaaactcatacgagagggagatgtttgacaaggccagtctgaaactgggattggacaag
gctgttctgcaagacatcaaccgcaagggcagtctcaatggggttcagcaactgtctaag
atggaggtagaagatcttctcaggaagggggcttatggggcgctcatggatgaggaagat
gagggatctaaattttgcgaggaggatattgatcagatcctgcagcgacgcacacagacc
atcacaatccagtctgaggggaagggatcaacttttgccaaggctagctttgtgtcttca
gggaaccgtacagacatctctctggatgatccaaacttctggcagaagtgggccaaaatt
gctgaactggaaattgactccaaggcagaaaaggagagtctggtgatcgacacacctcgc
gtacggaagcagacgcgtcactataattcatttgaggacgatgaactgatggagttctct
gaactggatagcgactcagaagaacgtccctgtcgcacaagacgtctcagtgatcgcaac
agacgctacctccgagcagagtgcttcagagtggagaaaaaccttcttatttttgggtgg
ggtcgctggaaggatattctcaatcatgggcgttttaaatggcacctgtcggagcgagac
atggaggtgctgtgcagggctcttctggtctactgtgttcgccattataaaggagacgac
aaaattaaaagcttcatctgggatctgatcacacccactaaagacggacataatcaagca
ctgcaaaaccactcaggtctgtctgctcctgtcccacggggtcgtaaaggcaagaagctg
aagaaccagttgagtccacctgagctaaagagtgccgactggctggtccactgtaaccca
gaggtcgtgcttcaggacgacagctacaagaaacacctcaaacaacactgcaacaaggtg
ctactgagggtgcggatgctgtactatctgaaggttgaagtgctgggggaggctgctgat
caggctcttgaagggatcccagccagtaaactggaggtaacactgcctgatatcgactac
attgagatccctactatatggtgggatgctgaggcggataaatctctgcttattggggtt
cacaaacatgggtatgagcggtataatgccatgcgtgcagaccctgctctgtgcttcttg
gagcgggtgggaatgcctgatgtcacttcactgacggtagaacaaggtggagcagaaact
gcttcagatgcacctgatagtatcagtaagagtgatgaaattaaagaggaaaacgacatg
aagtctgaggaattagaagagaaagtagagatcaaggaggagcccatgtcagaagaaaca
gggaaaaatgacactacggtgacagggggctttgtagcatctcttgcaggagacctaatt
acagagatgatggaacaggggcggatacagtggccggcaggctcggctcttacagcacgt
ctacgccgcctcattactgcatatcagcgttacacacggcgtgagccgcttcgtcatgat
ttcctcttacacgatggaattgcacctgtggcatggcaaattggagagtttaggcactgc
acaactgagcctgacccgctctttttggagtggcaacgaaggtggacacgtcgtgaacag
gctgacttctatcgcacagtgtcctcgtttggagtagtgtatgacccagagaagaaaacc
tttgactggggccagttccgtgcccttgctcgattggagaggaagacagacgaaagtttg
gagagatatttccacagttttgtttcaatgtgtcgcactgcatgtagactaccgcctaga
aaagatgaaggtaccgttgattcttcgctgttggtggaacccattacagaagagcgagct
gcccgaacattataccgtatcgagcttttgagaaaggtccgtgaacaagtattgcggcac
ccactcctggggtcacgactgcagctttgtcgccctagtctgtacttgcctgtctggtgg
gagtgtggcaaacatgaccgtgatcttctcattggtgtcgctaagcatggcttgagtcga
actgacttctacatcctcaatgacccacaactatccttcctggaggcccatcggaactat
gttcataaagaaaaccacagatatccagtcccaggcttgccccaccatcattgctgcttg
tatgatgccaacctcggacattgtcagtccccacaacctctggagtatcaccacacacat
tcaccccacacgccaacacaacttgtccatacacatgggcatcaccaacccacagaagtg
gtggcgtcagagccaggaagttccctggggataggtacaggaaacagagatggatttttg
gactgccctccattggatgactcactggagttggggtctttacaacatgaaggcttgaca
tcagacacactacatagcaaatctggtaaagaggccttcaacggattcccgttcaattct
gcaactggtgggcagaatatgctaaattcatatggtgtgcaaggggagctaaatggggct
caaggagacatggcggactccatagctgggaaacttcgcagcgatgttctcgtgggagag
caaggttcctcagaggagactggcttaatggctccttctgtggaactcgatgaacttcaa
actccatgggaaagctcagaccatgttgaaacctctgacatgttcaacgagactgatccc
attttgggagcacaagctttggaacccagctttctggatgctcctcagccagacgatgga
cgggagggtgatgaaacgctaactgactgtttgagcatgcccagttcggactctcaaagc
aaccctgtcgagccactggctccgagctttatgttgttcaaagaccttaatgttggagag
acgtctgtggatcagacagatctatcagccagtcttccagaatttgttccaccacctctt
ggtctcccggatgtgagtcttgaccaggcagatcccatcagtgaggatcaagaggacaag
cttagcgattccaacatcacacatggtgttcccagtccaggagaaggagctgaaagcata
gggttccattttgagaaagaagacctttctccagacagttcgaagactaaggattctcaa
gatgaaattgacaagatgccttcaatagagtctccaagggaaaattgtcttgaggaatcc
cagaaaggggactgcaaggtgacatttgatgattccaatgaaggagacttgaaagatcct
tgtgaagtggccttggaagaatcttatgtaaagcctctaagagagccagaaaaagtgcct
ttagaggagtcttatgatttgacttgtgacgagaccctgcaggaaccttgtgaagggttt
cagcaagacgcagctgaacagcacttggtggaagaaccctctgaagaatcctgcaaagaa
ctgtcagagccaatagaagagtgcaatctaactaacactactctctcaacagattaccct
ttgccttcttcactcccatcatctccaactaccttacctgacacctctgtatctccagtc
cttgatgcagtcccaaaacaagagttcctcatggatccagtggtgtcagatgtgaagcct
gagccagacagcactacgcagacccctcaccttgagcagactgaggttttggatgtaaag
gacaagataaaagacgaaggtgcaaagacaccagcattattgggagatgttgatgcacca
cgctttgcgctgcccatgtgcgagatggcagacaatgtccatgaaataagggaaccaacc
attgctcagcttttacaggagaaagcactcttctccttctcagagtggcctaaggacaga
gtgatcatcaaccgtattgatagtatctgccatactatcttaaaggggaagtggccttcc
tctagtcaacagtacgagtctcccaccgcattggctaacacttgcatgcccagtagtgcc
caccagagggcaggatttctgcctaccagaatgcctatatctcagagccttaacttcaac
ctcacacacacagtaccccacttaccaaaggagaggttagttgccccagcatttctccct
gagctcaaacgtcccagacgtgggtttgaattcgaggcagaagttcttgccaaaccaagc
catcttggagaaaagattcaggttggcgtgcctcatcgtgctaacactctcctccttaat
ggctggcaggatactgctattgacctctccaaaccaacagagctaacagttggtggagac
agtgggccaatcagtcatatgagccacactgtccagtcagcaccccacaaaataacaggg
ataggctccatacaaggctcactgggattagatatggctggcattttgcaggctggcttg
attcaccctgtcacagggcagattgtcaacggcagtcttcgtcgtgatgattcaatgttg
agacggaggagaggacgaagaagaaatgtagagactcctgatctcggctttatgaaggga
cgagccatgaacttgcctgaacaacagtgtgggtcagagagcatcagccagcctgttgtg
tcctcaacatcctctcagtcagaatgccctccatccaccccgactacacttcctactcac
cctccagcatcatctccagctcctcctccagcctcagaggccctgaatgtgagcgtggac
agggaaacggccaataaaggcctaatggaatggctccgacaaaaccccaactacaacatg
gagctttccgcttttccatcgtctcagaatgtgagcatgttgcacagtttcttggagcgt
ccaaagcagagaaggcatcgctgcaaagaccccaccaagctcgacgtcagctctctaact
ggagaggagagagtcccagtagtgcacagaaacacaggccgcaggcttggaggcgctatg
gctccagccattaaagagctctcccgatggctggatgcaaattcagaatactctgtggct
cctgattgggcggatgtggtgaagcattcaggttttctaccggagggcaaattcacacgc
atcctcactggacccgtgtgtcgggatcccggtccacgcagaagaggcaggcgaccccgc
agcgagatgcccaaagcccccgagctcccctctggcatgggtccgctcttcatgaacggt
gggcttattagcagtatggatctggttagtttacccagtctccgcaatgtccctggcatc
ccgctaactggtatcatgggctttcctcatggtttcgccgctgccgtatcatcaggagat
gatgccaagaatggactcggcatgctgcccatgatgctccacggcatggcggccgttcag
ccgcccatgtatagcgctcacatgagtgggatgatgagtcagtcgctgtccacagcgaca
tccactacatccaccgcaaccgcatcctccactacagcgagtgtgacttctacgaactct
gcaaccgtaacctcaacctcaagcccggcggatagttcggatactgtacctcagcgggat
aacgcaagctctccgatgagcacggagaactggaataaggaggatgcaaagcaaggaggg
gaagagaagaaagtgtccgcttcggtgtcaacggctgcggccactagcaacagtagtagt
agtagcatcacaagcaccggcagccatttgacctttaaccccttcctaatcccgggaatg
tcgcatagtttgttgtatccgcatatgttcttgccaccaggcagtataatggcgctgccc
gctatgcctgcagcagacagcacgggcagccctaagaggaagaggaagaaggtcagggag
gaaggaccggtggagggaagtggaaacgttggtgtgcagatggacggcgaggaatcgaag
ggggttaaagtcgaacagacacccgaacgaaagagccaagagggcggaatggaagaagat
ggacatgatgtaaatttggctctggtcaaagatccttctgaccatataaaagatccttct
gaggataaaagtactgaagaaaaggaaaaaaacgaaatgggagaggaacctgagcaagat
gctcaaggcccatgtgatggtggagactag
DBGET
integrated database retrieval system
