Ctenopharyngodon idella (grass carp): 127514820
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Entry
127514820 CDS
T08802
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127514820
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127514820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_9
Ig_3
LRR_1
ig
Ig_2
V-set
Pur_ac_phosph_N
Sp38
fn3
LRRNT
Ig_C17orf99
LSR
LRRCT
Ig_5
Motif
Other DBs
NCBI-GeneID:
127514820
NCBI-ProteinID:
XP_051753978
LinkDB
All DBs
Position
6:complement(26041299..26053824)
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AA seq
717 aa
AA seq
DB search
MARGTFFFVVQGQICFFLFLALLGLSSVQSTECPQLCVCEIRPWFTPQSTYREATTVDCN
DLHLTRIPGNLSADTQVLLLQSNYIARTSEELEQLLNLTELDLSQNNFSNIRDIGLTNMS
QLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNRL
KAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGLD
NLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGE
LVSIDRFALDNLPELTKLEATNNPKFSYVSRLAFRDLPSLESLMLNNNALNSLYQATAES
LPNLREISIHSNPLRCDCVIQWMSSNKTNIRFMEPLSMFCAMPLEVRGQRVRDVLSHETS
GQCLPMISHDTFPNHLNLDIGMTVDLDCRAMAEPEPEIYWVTPSGNKVMMDTVSDKYQLS
SAGTLRISHIQVDDSGHYTCVAQNTEGADTRVTAIRVNGTLLDSTQLMKIYVKQTESHSI
LVSWKVNSNVMTSNLKWSSATMKIDNPHITYTAKVPVDVHEYNLTHLQPATEYEVCLSVS
NIHQQTQKSCVNVTTKHATFAVEISEQGTNTALAGVMGTILAIISLGSITVYIAKRWKRK
NYHHSLKKYMQKTSSIPLNELYPPLINLWEADSEKDKDGSSDTKPTQVDTTRSYYMW
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagggactttcttttttgttgtgcagggccagatttgtttcttcctgtttttg
gctttacttggcctctcttcagttcagagtacagaatgtccgcagctttgtgtgtgtgag
atccggccttggttcacaccccagtccacctacagagaagcaactactgttgattgcaat
gaccttcaccttacgcgcatccctgggaacctgtccgctgacacgcaggtgttgcttctg
caaagtaactacattgccagaactagtgaggaactggagcagttactgaatctcacagaa
cttgacctgtctcagaacaatttcagcaacatccgtgatatcggcctgaccaacatgtca
caactcacaacgcttcacctggaggaaaaccaaatagtcgagatgcctgacttcagtttg
caagacctcaccaatctacaggagctgtacattaatcacaatcagatcagctccattgca
cccaatgccttcgccggattgcgtaaccttctgagactccatctgaactccaacagactc
aaggccattgacagtcgttggtttgaatcaacccccaacctggagatcctgatgattggg
gaaaatcctgtggtcggcatcctggatttgaacttcaaacctcttaccaacttgagaagc
ctggtcctcgcaggaatggagctcactgatatcccaggcaatgcgtttgttggactagac
aacctggagagtctctccttctatgacaataaactagttcgggtgccacagactgctctg
cagaagcttccaaacctgaaattcctggatttgaacaaaaatccaatacataaaattcaa
gagggggactttaagaacatgctaaggctgaaagaacttggcattaacaacatgggagaa
cttgtgtccattgatcgctttgccctggataacctcccagagttgaccaaactcgaagcc
accaacaaccccaagttttcctacgtgagccgtttagcattccgtgacttgccgtcacta
gagagtctaatgctcaataacaacgctctaaactccctctaccaggctacggcggagtcc
ctgcccaacctgagggagatcagtatccacagcaacccgctgcgctgcgactgtgtaatt
cagtggatgagctcaaacaagacaaacattcgatttatggagcctctttccatgttttgc
gcgatgccacttgaggttagaggtcagcgtgtgagagacgtgctttctcatgaaacttca
ggccagtgtctgcccatgatctctcacgacactttccccaatcacctcaacctagacatc
ggaatgacggtagaccttgactgtcgtgctatggccgaacctgaaccggaaatatactgg
gtgaccccatctggtaacaaagtcatgatggatacagtgtccgataaataccaactcagc
agtgcaggaactctgcgcatatcccatattcaggtggacgactctggccactacacctgt
gtggcccaaaatacagaaggagcggacactcgggtgaccgccattcgagtcaatggaact
cttctggatagcacccaacttatgaagatctatgtgaaacaaaccgagtcccactcaatt
ttagtgtcctggaaagtgaactccaatgtcatgacgtccaatctaaagtggtcgtctgcc
accatgaaaattgacaaccctcacatcacctatacagctaaagttcctgtagatgttcat
gagtacaacctcacacaccttcaaccagccactgagtatgaggtctgtctctcagtctcc
aatatccaccagcagacccaaaagtcatgcgtcaacgtcacaaccaagcacgccacgttt
gcagtggaaatctcagagcaaggcaccaatacggctctggcaggtgtcatgggcacaata
ctggccatcatcagcctaggctccatcacggtgtacattgcaaagagatggaagaggaag
aactaccatcactccttaaagaagtacatgcagaaaacctcctccatccccctaaacgaa
ctgtatcctcccctcattaacttatgggaggcagacagtgaaaaggacaaggacggttct
tcagacactaagccaacacaggtggacacaacaagaagttattacatgtggtga
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