Ctenopharyngodon idella (grass carp): 127515516
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Entry
127515516 CDS
T08802
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127515516
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
127515516
NCBI-ProteinID:
XP_051755195
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All DBs
Position
7:13825613..13918027
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AA seq
1902 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFKLHN
LRKLGLSDNEIQKLPPDVANFTQLVELDISRNDISEIPENIKLCQALEIADFSGNPLTRL
PDGFTQLRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLD
LGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEIS
GLIALTDLLLSENLLEVLPDSIGSLKKLSILKVNQNRLVHLTDSLGECENLTELMLTENL
LQSLPRSLGKLKKLTNLNVDRNRLSSVPAELGGCVSLNVLSLRDNRLGKLPAELANATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SSSLENLLDRSADETWPTDTNLNRVSVIQFRDDSKHEEEDEETAAERRQGLQRRATPHPS
ELKVMKNVIEARRNEAYTAKPDEDLESPDSEEKRLSGLSNQSHDSQASSSTASATSQDEK
RAINSTGMELNNGQGQEEEELDEMEVEYSEPTVHFAEEPIIRGGDDEEDENEEDDEDAER
SDEDSRTPPFPAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLQGYGHDGLSPTAHTPE
DERDGDVEEEEEEEEEDEGGVIVNTPFQHRLETAELEDSRLSQMNSSLQPVKGVSFDQVN
NLLIEPARIEEEELTLSILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG
VKVGDKLLEVNGVDLHGAEHHTAVEALRNSGAAVSMTVLRERMVEPENAITTTPLRPEDD
YFPRERRSSGLPFLLDPASPAVSTGPSQRLATCLIRNDKGLGFSIAGGKGSTPYRVGDTG
IFISRIAEGGAAHRDNVLHVGDRVISINGVDMTEARHDQAVALLTGTSPTITLLVDRDQA
SAGGASPRTRPHSPPPPEPSDSPEQEEGDEHLGNHLNCPMEDEYPIEEVTLIKAGGPLGL
SIVGGSDHASHPFGVNEPGVFISKVIPNGLASQSGLRVGDRILEVNAIDLRHATHQEAVR
ALLSNKQEIRMLVRRDPSPPGMQEIVIHKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFI
SKVSSSGAAARDGRLRVGMRILEVGNNSLLGMTHTEAVRVLRASGDSLVMLVCDGFDPRN
ATGIEASPGVIANPFAAGIVRKNSMESISSVDRDLSPEEIDIMQKEVEMVRETSQWEREE
MEKVERMRLEREEATRLLEEETENLSTGPLKLDYKTLAALPTTSLQKVNRGSSSEPHRID
SPVRDAAYSPHNSQSNIQFPSHANNKDNSSTKPGAIQPLSRVRPAVSPASQDGHSSPNPF
QHGLSPISSQTTPRAPSPDTHEEYPINIKQVYKAFAAVPHSLAILEPPQDLYSPRNNVSA
KQPSPEPELNNEVFMDEGDGEGNGPLGSRPSLSSDRREYRSLAAVPRLSRPSMESKTPSS
FGRDSPEQRSFRDRQKYFEIDVKQQTPDKPKPRISLVGEDDLKKMKEEEAKRIEQRAQEY
MLDEDEEEEEDLAKQVADMKAHGKVILDGVEYKVESLGSHSSPSPRQCATPPSYSATPPS
HCGSSGPSSIDGKGDSQRNSVEDSFRLEQRPNSMTGLIPVYPGESVAPIRTAKAERRHQE
RLRMQSPELAVAVDKELSPAEKRALEAEKRAMWRAARPYGLEEDVRQYEQDLAKRLYQSR
VRASLGSAAAPPTSCSSSSCQPRMKSLEQDALKAQMVIAKSKEGKKRGTLDQLSESPSPA
PTPSPTPMEDISPRAVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSPGAGDDVRFMDD
ASSNPDPEVPVATTSALEEMALYSNKRKLRQGRRSLEAPVPT
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatcccgctgtggcggtgcaaccgtcatgttgagtctgtggacaagcgg
cactgctcgctcactgcggtgcccgatgagatctaccgctacaaccgcagtctggaggag
ctgcttctggacgccaaccagctgagagagctgcctaagcctttcttcaaactgcacaat
ttgcgaaagctgggcctcagtgacaacgagattcaaaaattgccgcccgacgttgccaac
ttcacacagctggtggagctggacatctccagaaatgatatttctgagattcctgaaaac
attaaattatgtcaggccttggagattgcagacttcagcggaaaccccttgaccaggttg
cctgatggcttcacacagctcagaggactggctcacctatcactcaatgacgtgtcactg
cagtctctacccaatgacataggaaacttgtcaaacctggtgactctagagctgagggag
aatctactgaaatctttaccttcctctctttccttcctggttaaactggaacagctggat
ctgggcagcaatgtactggaagttttgcctgacacacttggggcactgcccaatcttcgt
gagctgtggttggacagaaaccagctctcctcactacctcctgagctgggcaacctgcgg
cagctggtttgcttggacgtgtcagagaaccgtctatcagagcttcccacagagatcagc
ggccttatcgccctcacagacctgctgctctccgagaacctcctggaagtcttgccggac
agcattggctcgcttaagaagttgtcgattctgaaagtgaaccagaaccgcttagtacat
ctcacagactctcttggcgagtgtgagaacctgacagagctcatgttgactgagaacctt
ctccagtccctccctcgctcactcgggaagctgaagaagttgaccaacttgaatgtggac
cgaaaccgcttgagcagcgtcccagcagagctggggggatgtgtcagtttgaacgtgctc
tccctcagagataaccgcttgggaaagctacctgctgagctcgccaacgccacagaatta
cacgtgctggacgtggcaggcaacaggttgcagaacttgccattcgcattggccaatctg
aacctgaaggccatgtggctggcggagaaccagtctcagcccatgctgaaattccagaca
gaggatgatgagcggactggggaaaaagttctcacctgctacctgctgccccagcaaccc
tcatcaagccttgagaatctgttggacaggagcgctgatgaaacctggcccacagacact
aatttgaacagggtatcagtcattcagttccgggatgactccaaacacgaagaggaagat
gaggagactgcggcagagaggaggcagggtcttcagaggagagccacaccacatcctagt
gagttaaaggtgatgaagaatgtcattgaagccagaagaaatgaggcatatacagccaaa
ccagatgaggatctggagtccccagactctgaggagaagcggttgagtgggctgtccaat
caaagtcatgattctcaggcttccagtagcaccgcctcggccacttctcaggacgagaag
cgggctataaacagtacagggatggagcttaataatggacagggtcaagaggaggaggag
ctagatgagatggaggtggagtattctgagcccactgtgcactttgccgaagagcccatc
atccgtggcggtgatgatgaggaagatgagaatgaagaagatgatgaagacgctgaaagg
agcgatgaggactcccgaacgccaccttttcctgccgagaaacaacggctcatacgtaaa
gacacaccacactacaaaaagcacttcaagatcaccaagctgcccaaacccgagactgtc
gccgccctgctgcaaggctacggtcatgacggcctgtcacctactgctcacacccctgag
gacgaaagggatggtgatgtggaggaggaggaggaggaagaggaagaggacgagggagga
gtaatagtcaatactccattccagcacagactagaaactgctgagctagaagacagcagg
ctgagtcagatgaactcgtccctgcagccggtgaagggggtgtcatttgatcaagtcaat
aatctgctgattgagcctgctcgaattgaggaggaagagctgaccctgtccatcctgagg
cagactggtgggttaggcatcagcatagcaggggggaaaggatctacgccctataagggt
gatgatgagggtattttcatttctagagtgtcagaagaaggccctgcagctcgtgctggg
gtcaaagtgggagacaaacttcttgaggtgaatggagtagacctgcacggagcggagcat
cacacagctgttgaggccttacgtaactcgggggcagccgtgtctatgaccgttctgcgg
gaacgcatggtggaaccagagaacgccatcaccaccacgccgttgcgaccagaagatgat
tatttcccccgggagagacggtccagtgggctgcctttcctcctggaccctgcctcacct
gctgttagcactggaccttcacagcgactagccacttgtctgatccgcaacgataaaggt
ttaggtttcagcattgctggagggaaagggtcaaccccgtaccgagtaggagacacggga
atcttcatctctcgtattgctgaaggaggagctgctcacagagacaacgtcctgcacgtg
ggagacagggtcatatcaatcaatggtgtagacatgacagaggccaggcatgaccaggca
gtagcgctgcttactggcacctcccccaccatcaccctcctggtcgatcgggaccaggcc
agtgcagggggcgcctcccctcgaacgcgacctcattcaccccctcctccagagccatct
gactcacctgagcaagaggaaggagacgagcaccttggaaaccatctcaactgtcccatg
gaagatgaataccccattgaggaagtgacgctgatcaaagcgggtggtcccctgggtttg
agcattgtagggggtagtgaccatgccagtcacccgtttggagttaatgagccaggggtg
ttcatctcaaaggtcatccccaatggcttggcctctcagagtggacttcgtgtgggtgat
cgtatcttggaggtgaacgccatcgacctgcgacatgccacacaccaggaagctgttaga
gccctgctctccaacaaacaggagatccgaatgcttgtgcgcagagatccctcgcccccc
ggcatgcaggagattgtcattcacaagcagcctggagaaaagctaggcatcagcatcagg
ggcggagctaaaggccatgcaggaaacccctttgaccccacagatgagggcatcttcatt
tccaaggtgagctccagtggtgccgctgcacgagacggccgactgcgggtgggcatgcgt
attcttgaggtgggcaacaacagtctgctgggtatgacacacacggaagcagtgagggtc
ttgcgtgcttccggtgattccttggttatgcttgtgtgtgatggctttgacccaagaaac
gctacaggcatagaggcatcccctggtgttattgcaaacccgtttgcagcaggtattgtt
cgtaagaacagtatggagagcatctcatcagtagacagagacctgagtcctgaagagatt
gacatcatgcagaaggaagtagagatggtgagagagacatcccagtgggaacgggaggag
atggaaaaagtggagcgtatgcgcttggagcgcgaggaggcaactcgcttgctggaggag
gaaactgagaatttgagcactggacccctgaaactggactacaagacactggcggctctg
cctacaactagtctacagaaagttaacagaggttcatcatctgagcctcacaggattgac
agtcccgtccgagatgctgcctactctccacacaactcgcagtcaaacattcagtttcct
tcacatgcaaacaacaaggataattcatcaacaaaacctggtgccattcagccactctct
agggtgcgacccgctgtgtctccagccagtcaggatggccacagcagtcccaaccctttc
cagcatggcctctctcccatcagctctcagaccactcctcgtgccccatcccctgacaca
catgaggaataccccatcaatatcaagcaggtatataaggccttcgcagctgtgccacac
tccctggccatactggaacccccacaggatctttactctccacggaacaatgtcagcgca
aagcaaccatcaccagagcctgagctgaataatgaggtgtttatggatgagggtgatggt
gagggcaatggtcctctcggctctcgcccctccctctcatctgaccgccgcgagtacagg
agcctggcagccgtgccacgcttgtctcgcccctcaatggagtcgaagactccctcctct
tttggcagagatagtccagagcagcgctcctttagggacagacagaaatattttgagatc
gatgtgaagcagcagacaccagacaaacctaagcctcgcatctctcttgtgggagaagat
gacctgaagaaaatgaaagaggaagaagcaaagcgaattgaacagagggcacaagagtat
atgctggatgaagacgaggaggaggaggaagatctggcaaaacaggtggcagatatgaag
gctcacggaaaggttatacttgatggtgtggagtacaaggtggagagcttgggaagtcac
agttccccatctccacggcagtgtgccacgcctccgagctatagtgccacacctcccagc
cactgtggcagctcaggtccttcctctatcgacggtaaaggagactcccagcggaattca
gtggaagacagcttcagactggagcagagacccaattccatgacgggtttgatcccagtt
tatcctggtgaatctgtggctcccattcggacagccaaagcagagcgtaggcatcaagaa
cggttacgcatgcagagcccagagcttgccgtcgctgtggacaaggagctgtcgcctgct
gaaaaacgagccctggaggcagagaagagggccatgtggagagcagctaggccttatggt
ctagaggaggacgtaaggcagtatgagcaagacctggctaagcggctctaccaatcccgt
gtgagggcgtcactaggcagtgctgcagcccctcccacttcctgctcctcctcttcctgt
cagcccaggatgaagtctctagagcaggatgctttgaaagcccagatggtcattgccaag
tctaaagaggggaagaagcgtggaacgttggatcagctgtcggagtcaccgtcacctgcg
cccacaccctccccaacaccaatggaagatatcagtccacgggcagtgacttcaccaggc
agactgtccctgtcagaaaagaagtttgactaccgacaattcgctgccattccttcttcc
aaacccgtttacgacattcagtcccctggtgcaggtgatgatgtgcgcttcatggatgat
gcctccagtaacccggatccagaagttcctgtggccaccacgtctgctctagaggagatg
gctctctacagtaacaagcgcaaactacgacagggccgccgcagcctggaggctcctgtg
cccacataa
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