Ctenopharyngodon idella (grass carp): 127515569
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Entry
127515569 CDS
T08802
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127515569
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127515569
Enzymes [BR:
cide01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127515569
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127515569
Ubiquitin system [BR:
cide04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127515569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
127515569
NCBI-ProteinID:
XP_051755344
LinkDB
All DBs
Position
7:45377451..45421467
Genome browser
AA seq
1371 aa
AA seq
DB search
MEMVPSEEKQLVPKEGIFWSCRQSIFEEMQKRFSQIESAAEEPRVLCIVQDTTNAKTVNE
RLTINLPASTTVNKFFEDVSHKAGYVNGTFCLAWASAGDMAPLDQASEMSLVLSGFEAGK
KNFLQLTDKDGEQPQIASDESGTADSSGLDDSSQDRFIGPLPRDGTVGCSSDYSSPSYSY
SSILNKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEDSEEDPVTSIPYQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQVFGSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELD
MSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLDNTSSAERVL
KPKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDSQWYSFNDQHVSKITQDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLMYRLKDPSRNSKFLEVEDFPEHIKRLVQREKESEEQEKRQ
REIERNTCKIKLFCMHPVKLMMMENKLEVHKDKTLREATEMAYKLMDLEGVVPLDCCRLV
KYDEFHEYLERSYEGEEDMPMGLLLGGVKSSYMFDLLLEIRRPDQAFQPYKPGEVMVKVH
VVDLKSESIAAPVSVRAYLNQTITEFKQLIAQATGLCAETMRVVLERCYNDLRLLYVPNK
TLKAEGFFRSNKVFVESSDSTDHQVAFTDSVLWKLLDRHGNTIRLFVSLPEQSPGSLANR
TICPKASADSEDSFDGAKGSRKSVEAILEESTEKLKNLSLQQQQQTSSTSDSQKSSEHSD
FEHIESPAQEPDTTSQPSQTENCTRVASDTENQFPSEERSDSDVNNDRSTSSVDSDILSS
SHSSDTLCNADSGPLPLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDENGK
SKAEAQYLYFKAEPYSQEDGSGEGQKCLLVHVDKRITLAAFKQNLEPFVGVPSTQFKVFR
VYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNDPEPCKFLLDT
VFAKGMTVRQSKEELLPQLKDQCKLDLSIDRFRLRKKTWKNPGTVFLDYHVYEEDINISS
NWEVFLEVLEEPERMKSMSQLAVLTRRWCPAQMKLEAFREVVLESSSVEELKEKLSEMSG
IPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDSTEEL
MELSEEERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPTKDPGQD
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagaaaagcagcttgtgcccaaagagggtattttttggagt
tgcaggcagagtatttttgaggagatgcagaagaggttctcacagattgaaagtgcagcg
gaggagccgagagtgctgtgtatagtgcaggacaccaccaatgccaagactgtcaatgag
aggctgacgatcaacctgcctgcctccaccaccgtcaacaaattcttcgaggatgtgtct
cacaaggctggatatgtgaatggcactttctgcctggcatgggccagtgctggcgacatg
gctcctctggaccaggccagtgagatgtccctggtgttgtccggttttgaggcggggaag
aagaatttcctgcagcttacagacaaggatggggagcagcctcagatcgcttcagatgaa
tctggcacagcggacagcagtggtcttgatgacagctctcaagatcgctttattggaccc
ttaccgcgggacggtactgtgggctgcagcagtgactacagcagccctagttactcgtac
tcctccatactcaacaaatcagagacaggttatgttggtttggtcaaccaagcaatgacc
tgttacctgaacagcctcctgcagaccctgttcatgacccctgagttcaggaatgcactc
tacaattgggagtttgaggattccgaggaggatccagtcaccagtatcccataccagctc
cagaggctgttcgttctcctgcagacaagtaagaagcgcgccatcgagaccacagacgtg
acccgcagctttggctgggacagcagtgaggcctggcagcagcatgacgtccaggagctt
tgcagagtcatgtttgatgcactagagcagaaatggaaacagaccgagcaggctgacctg
atcaaccagctttaccagggcaaactgaaggactatgtgcgctgtttggagtgtggctat
gagagctggaggattgacacatacttggacatccctctggtcatcaggcccttcggggcc
agccaggtttttggtagcgtggaagaagccctgcaggccttcatccagcctgagactctc
gacgggcccaaccagtacttctgtgagcgctgcaaaaagaaatgtgacgcccgcaaaggc
ctgagattcctccatttcccatacctgctgactctgcagctgaaacgctttgactttgat
tacaccactatgcaccgcattaaactcaatgaccgcatgaccttccctgaggagctggac
atgagccctttcatcgacgtcgaggatgagaaatcacctcagacagagagctgcactgac
agtggggcggagaatgaaggaagctgccacagtgaccagatgagcaatgatttctccaca
gatgatgccgtggacgagggcatctgtctggataacaccagcagcgcagagcgggtgctc
aaaccaaagagctctttgacctttgaactcttctcggtcatggtgcattctgggagtgct
gcaggcgggcactactatgcctgcatcaagtccttcagtgacagccagtggtacagcttc
aacgaccagcacgtcagcaagatcacgcaggatgacatccggaagacatatggcggatcc
tcagggagcagaggctattactccagtgcctttgccagctctacaaatgcatacatgctc
atgtacagactaaaagacccctccagaaattcaaaattcctggaagtggaagacttccca
gagcacataaagagactggtgcaacgagagaaagaatctgaggagcaggagaagaggcaa
agagagatcgagcgcaacacatgcaagatcaagctattctgcatgcatccagtgaagttg
atgatgatggagaataagctggaggttcacaaggacaaaactctcagagaagcaacagaa
atggcttataagctgatggatctcgagggagtggtgccactggactgctgtcgattggtc
aaatacgatgagtttcatgaatacctggaacgttcgtatgaaggtgaggaagacatgccc
atgggtttgctgctcggcggggtcaaatcttcatacatgtttgacctgctcctggagatc
cgcagacctgaccaagcctttcagccctacaaacctggagaggtgatggtgaaggtccat
gtggtggatctgaagagcgagtcgattgctgctccagtcagtgtcagggcatatctcaac
cagaccattacagagtttaagcaactcattgcacaggccacgggactttgtgcggagacg
atgcgtgtcgtcttagagcgctgctataatgaccttcgtcttctttacgtgcccaacaag
actctgaaagcagagggtttcttcaggagtaacaaggttttcgtggagagctcagactcg
acagatcatcaggtggcgttcactgactctgttttgtggaagctcttggatcgccacggg
aacacaatcagactgtttgtctccctgcccgagcaatcgccaggctctttggccaataga
actatttgccccaaagccagtgctgactctgaggactcttttgatggggcgaagggcagc
aggaagtcagtggaggccattcttgaagagagcacagagaagttgaagaacctttcttta
caacagcagcagcaaacctccagcaccagtgacagtcagaagagctccgaacacagcgac
ttcgagcacatcgagtcaccagcacaggagccagacaccacatcacagccttctcagacg
gagaactgcacacgggtcgcctccgacacggagaaccagttcccctctgaggagcgctcg
gactcggatgtcaataacgaccgcagcaccagctcggtggacagtgacatcctgagctcc
agccacagcagcgacacgctgtgtaacgcagacagcggccctctgccgctggctaacggc
ctcgactcgcacagcatcaccagcagccggcgctccaaagcacacgaggggaagaaggag
acgtgggacacggcggaagaagactcgggcacagacagcgagtacgacgagaacggaaag
agcaaagctgaagcccagtacttgtacttcaaagcagagccgtactctcaggaggatgga
tccggagaaggacagaaatgtttacttgtccatgttgacaagaggatcacactggctgca
ttcaaacagaatctagagccgtttgttggcgttccctccactcagtttaaggtcttccgt
gtttatgccaacaaccaggagtttgagagcgtgcggctcaatgagactctctcctctttt
tctgatgacaacaagatcacgattcgattgggacgtgcactgaagaaaggagaatacagg
gtgaaggtgtaccagctgctagttaatgacccagagccctgtaagttccttctggatact
gtgttcgctaagggtatgactgtccggcagtctaaggaggagttgctgcctcaactcaaa
gaccagtgcaaactggacctcagtatagacaggtttagactcaggaagaagacctggaag
aacccaggcacagtgtttctggattatcacgtctatgaggaggacatcaacatctccagt
aactgggaggtgttcctggaagtccttgaagaaccggagcggatgaagtccatgtctcag
ttagcggttctgacccgtcgctggtgcccagcccagatgaagcttgaggcctttcgggag
gtggtgctggagagcagcagcgtagaggagctcaaggagaagctcagtgaaatgagtgga
attcctttagaaaacttggagtttgccaagggacgaggaacttttccttgtgacatttca
gtgctggagatccatcaggatttagattggaatcctaaagtctccaccctcaatgtctgg
ccactctacatctgtgatgatggcgctgtgatcttctacagggacagcacagaggagctg
atggagctgtctgaagaggagcgcaatgaactgatgaagaaggagagcagccgcctgctg
aagacgggccaccgggtcagctactccccccgcaaagagaaggccctcaaaatctacttg
gacggagggcccaccaaagaccctggacaggactga
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