Ctenopharyngodon idella (grass carp): 127516332
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Entry
127516332 CDS
T08802
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127516332
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127516332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
U-box
DUF4407
DUF4201
V-SNARE
Motif
Other DBs
NCBI-GeneID:
127516332
NCBI-ProteinID:
XP_051756813
LinkDB
All DBs
Position
7:44090631..44099837
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AA seq
553 aa
AA seq
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MAETTFSQDQFSCPVCLDLLKDPVTLSCGHSYCMSCITSCFDQDEQKDVYSCPQCRQTFT
PRPVLGKNVVLAEMLDKLVKLKLQTVVPAQCYAGPGEVECDVCTGRKYKAVKSCLVCMES
YCQSHFERHEEFHSGKQHKITDATGRIQKKICHEHDRILEVYCRTDQQIICVLCMVDKHK
NHNTVSVAAQRKEKERHFKETLRKFQQRIQEKEKNLQELRSAVESYKCSAQTAVKESERI
FTELIRSIERRCSEVTQLIKDQEKAAVSQAEEFLKQLEQEIANLRRRDAELQEISHAEDI
QFLQSFQSLSVLPTDSPNITVSSLLSFDNVQKSVSHLRKKLEDFCQEEIKIISGRVNHIQ
IIPVPEPKTREEFLQYRSRFTLDPNTVNKKLRLSEGNRMATYTNKFSQYPDHPDRFDYWE
QVLCRERVCGRCYWEVELSRGVGISVAYKSISRKGTANACLLGYNGQSWKLSCNPWNSSF
YHNNRETKLPLVSSSCIGVYVDHSAGTLSFYNVSDSMTLIHREQTTFTEPLYPGFRVIEE
SSVKLCDLYVSEV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcggagactactttttctcaggaccagttcagctgtccagtctgtttggatctactg
aaggatccagtgaccctttcctgtggacacagttactgtatgagctgcattacaagctgc
tttgatcaggatgaacagaaggacgtttacagctgcccccagtgcagacagacattcact
ccaagaccggtgttaggaaaaaatgtggtgcttgccgaaatgttagataaactggtgaag
ctaaaactccaaactgtggttcctgctcagtgttatgctggacctggagaagtagagtgt
gacgtctgtaccgggagaaagtacaaagctgtcaagtcctgtcttgtgtgtatggagtct
tactgtcaaagtcattttgaacgtcatgaggaatttcattcaggaaagcaacacaaaata
actgatgccacaggacgaatccagaagaagatctgtcatgagcatgataggattttagag
gtttattgtcgtacagatcagcagattatttgtgtgctgtgtatggtggataaacataaa
aatcacaacactgtatcggttgcagcacagaggaaagagaaagagagacactttaaggag
actctgagaaaattccagcagagaatccaagagaaggagaaaaatcttcaggagctgaga
agtgctgtggagtcttataagtgctctgcacagaccgcagtgaaggaaagtgagaggatc
tttactgagctgatccgctctattgagagaagatgctctgaagtaacacagctgataaaa
gatcaggaaaaggctgcagtgagtcaagctgaagaattcttgaagcaactggagcaggag
attgctaatctgaggaggagagatgctgagctgcaggagatttcacatgcagaggacatc
cagttcctccagagtttccagtctctctctgtcctgcctacggactcacccaacatcact
gttagttctctcctctcctttgataatgtacaaaaatctgtctctcatctgagaaagaaa
cttgaggatttctgccaagaggagataaaaattatatctggtagagtgaaccacatccag
attattccagttcctgaacccaagaccagggaagagttcctccagtaccgcagtcgcttt
actctggatccaaacacggtgaacaaaaaactccgcctgtctgaggggaacagaatggct
acttacactaacaaattcagccagtatcctgatcatccagaccgatttgattattgggag
caggtgttgtgtagagagagagtgtgtggacgctgttactgggaggttgagttgagcagg
ggtgtgggtatatcagtggcatataagagtatcagcagaaaaggaacagctaatgcatgt
ttgcttggatataatggtcagtcctggaaactgtcttgtaatccctggaatagctcattt
taccacaataacagagagaccaaactgcctctagtgtccagctcgtgtataggtgtgtat
gtggatcacagtgcaggaactctgtccttctacaatgtctctgattcaatgaccctcatt
cacagagaacagaccacattcactgagcctctctatcctgggttcagggttattgaggaa
tcatcagtgaaactgtgtgatctatacgtatcagaggtgtaa
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integrated database retrieval system
