Ctenopharyngodon idella (grass carp): 127519094
Help
Entry
127519094 CDS
T08802
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator-like isoform X1
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cide03037
]
127519094
Cilium and associated proteins [BR:
cide03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127519094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
127519094
NCBI-ProteinID:
XP_051762503
LinkDB
All DBs
Position
9:complement(20063682..20084798)
Genome browser
AA seq
1854 aa
AA seq
DB search
MTGETDTEIPDTGAVFTFGKSKISNNVPSRLWLKNDIPVHISCGQSHSAFVTEQGRLFVF
GSNNSGQLGLQTKGPVTKPICVKVLKGERVQFVACGTDHTLVSTSQGEFFAAGGNSDGQL
GLGHRNDSISFQRLRPFCDYAPIKLLSAGGHTSAALTEDGRLFLWGDNSVGQLGLGNDSH
ALLPEEIKLGQPIQWVSCGFRHSALVTDNGDVFTFGESADERLGLSAHQLANHNCPQRVE
SLHGVLQVACGGKHTLALTEDELYSFGRGEFGQLGLGTQMFVTDAPVAVGHFRKGRVTHV
TCGENHSALITDSGLLYTFGDGRHGKLGLGDENFTNQFSPTVCQRFFDYSVMTVACGSSH
MLVFARPRQQDSEEVCLEDEDVTYSYLDRCYTSMLQGQPLEHIPEPVPAFLSQLIFLPSS
LPTSHRWSLSTTRARRRQRESSSAQFGPEFCNLPPLTTGFTALALTGNILQPRSPTDIPK
RFKTDAPVESPSTSITLPARTPPLTPITKSTEDCHSVGTSENSMSDKTHEQHKNKMARAS
SIGKEENVSQEAPSTEVQAGSVSHPSMTESLPPSNLKHKKPRSGNPKNPATQEKCFSTTA
SQSKIQSKTYQKPIQSTNNKSKVQALEVRLSPERMSANEREGCSETRSTNTDSRHKISKV
DKNSKVQQAFPRGQEVTTLAEMEQETKSGSLKIQNTSSPGQEVKQVRTMPTKVQEVKSHK
IKEEGIPVRVTKRVKSSAQVQEVPSGRMEVSVVESTLQADPAQKDIKLSIGKAQEIRSTL
IDTQEQGNPTSDKKPNTSKKGNEKIQVDAEENPGELTPKKAKKKRSDVQRAPMEETTPKT
PSPPSVSIPTRMSKAKKRKPVEAENSNVQLGTKMLAQVKRENDSKTPQNSNISFPPIENR
KSGGAAEISQSTSNLQSEHKNSQSPTDKALTEQKYEFPSIKSLTPERGPSFSSLWSNNKS
ATSKSSATKETESSSGNLLSPSRQHRRSPLNEIKLDAKSVEEPDRKPQAEQSIMGSVVSS
LPAMAIASAAPLLIKAAEVLSETSPEQSNDMSLCASVSQEMAGNNILTEQEVDQDSTVQD
VSAIEETDDSSTKKQSAQDVQNKLVLDENGKMVEEEDVRDSETEREEERGEEESLAEEED
ESEGVGQKEEGSTVEDEERESDNDEESDSAQKGEEDGEEEEGEEEESEAAGEEEDDSNSR
QSGKSEGEGRGDETEREEEESEGQVKEEGEDGEMEEEENKDEESGGEDEEEESESWDEGS
EGEVEDEEKTDAEEEQEGESSNEEKMEVGEQSDSEDENKNVRSDEEEGESEEKDGSEEEE
EEENETAEGEGEQEEKEDEESEEEDEVGNEDEEENQDEETDHEEEEGNRDQEEEEEENDE
QEEDEEDKEEEVDEEENNEELKYKKDGAINSEEEEGEESVREKEEQQNEVEADADEDRER
QEGSEQIEEEDEEKEEGEKEGEMDTSEVKFREEENLDISETQEEDRGDEDDEVNKPNEIM
EENNEEECGSEKEAETEEEETDKKEENKKTDRGGEKQTETNEEEEEDGEEEEEETEQTEN
NIKSEINRKQKESSEEEEEHEESEEEEEEKEEEAEQKEIKQRETSEEEQEEESEEEEEEE
AEWKDMNIKTEKNRIKQRETSEEEEQEEESEEEEEEEEAEQKEMNIKTEKNRMKQRETSE
EEEQEEEGDEDEEEEEEEEIEKKDKIGRKQTETTEGEEEEEEEEEGDEDEEEEGEEEEIE
KKDKIVRKQTETTEGEEEEEEEQEEEGEEEGEEEEEEEGEEEEEEGEEEKTKKVPKQRAK
LNVLPAHRQTNAQRDGQKTRQRDQQNVKGKKQADSGAQDPQFWNSVLPQYLNLK
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagaaacagacacagaaataccagatacaggtgctgtatttacctttggaaag
agtaaaatatcaaacaatgtacccagcaggttatggttgaagaatgatatacctgtgcac
atctcatgtggacagtcacactcagcctttgtaacagagcagggccgtttgtttgtgttt
ggaagtaataacagcggtcagcttggtctacaaaccaaaggaccggttactaaaccaatc
tgtgtcaaagttcttaaaggggagagagttcagtttgttgcctgtgggactgatcacaca
cttgtaagcacctcacaaggggagttttttgcggctggaggaaacagtgatggacagttg
ggactgggccaccgtaatgacagcatctctttccagcgcctccgccccttttgtgactat
gctccaatcaaattgctctctgcaggtggccacacctctgctgcacttacagaggatggc
aggctgtttctttggggtgataactctgttggtcagcttggtttggggaatgacagtcat
gccttattgcctgaagagataaaattgggacaacccattcagtgggtctcatgtggattc
aggcactcagctctggtcacagataatggggatgttttcactttcggggaaagtgcagac
gaacgactgggtctttctgctcatcagctggccaatcacaattgtccccagcgagtagaa
tctctgcatggggttctgcaggtggcatgtggaggcaagcacacgctcgccctcacagag
gatgagttatattcttttggccgtggggagtttgggcagttggggttggggacgcaaatg
tttgtaacagacgcacctgttgctgtcggccacttcaggaaaggcagggtcactcatgtc
acatgtggtgaaaaccacagtgcacttataacagatagtggtctcctgtacacatttgga
gatgggcgtcatgggaagttaggcctcggagatgagaacttcaccaatcagttcagtcca
actgtgtgccagaggttctttgattactctgtcatgactgtggcatgtggttccagtcac
atgctggtgttcgcacggccacggcaacaggacagtgaagaagtttgtttagaggatgaa
gacgttacctactcttacctggacaggtgttatacctcaatgttacaggggcaaccatta
gaacatattccagaaccagtacctgctttcctctcacaattgatctttctcccctcatct
cttccaacctctcaccgctggagcctatcaacaacacgggccagacggagacagagggag
agctcatctgcacagtttggtccagaattttgcaatcttcctccccttacaactggcttt
actgcactggccctgacaggcaacatcctacaacccagatctccaacagacattcctaaa
cgcttcaaaactgatgcccctgtggaatctccttctacctcaatcacactgcctgccagg
acacctccactcacacccatcactaagagcacagaggactgccatagtgttggaacatct
gaaaacagcatgtcagacaagacacatgaacagcataagaataagatggcaagagcctct
tctattgggaaggaagagaatgtttctcaggaggctccgtccactgaagtacaggctggt
tctgtttctcatccatcaatgacagaatctctaccaccaagcaatcttaaacacaagaag
cccaggtctggaaatccaaagaaccctgctacgcaggagaaatgtttttctactacagca
tcacaaagcaaaatacaatccaaaacataccaaaaacctatccagagtacaaataataaa
tcaaaagttcaagcattagaggtcagattatctccagagagaatgtcagctaacgaaaga
gagggatgcagtgaaacacgcagtactaatactgattcaaggcacaaaatttcaaaagta
gataaaaatagtaaagttcaacaagcctttcccagaggtcaagaggttacaactcttgct
gagatggagcaagagaccaagtcaggttcacttaaaattcaaaatacaagttctccaggt
caggaagtcaaacaagttagaacaatgcctacaaaagttcaagaggtgaaatctcataaa
atcaaagaggagggtattccagtaagagttacaaaaagggtcaagtcttcagcccaggtt
caagaagtgccctctggcaggatggaagttagtgtggttgaatcaacccttcaggcagat
cctgctcaaaaagacataaagctgtccattggaaaggctcaagagatcagatcaacactg
atcgacacacaagaacagggaaacccaacatcagacaaaaaacccaacacttcaaaaaaa
ggaaatgaaaagattcaagttgacgcagaagaaaatcctggtgaacttacaccaaagaaa
gcaaagaagaagagatcagatgtgcaaagagctccaatggaggaaacaacacccaaaaca
cctagtcctccatcagtttccatacccacacgaatgtctaaagcaaaaaagagaaaacct
gtagaggctgaaaactcaaacgtccagcttggaactaaaatgctagcacaagtcaaaagg
gaaaacgatagtaaaacacctcagaactccaatatatcatttccccctatagagaacaga
aaatcaggaggagctgctgaaataagccaatccacttcaaacttgcagtctgagcataaa
aatagccagtcacccactgataaagcacttactgaacagaaatatgaatttccatcaatt
aaaagcttaactccagaaagaggcccctcattttccagtttgtggtccaataacaaatca
gcaaccagtaaatcttctgccacaaaagaaactgaatcatcatctggtaatttgttaagt
ccatcacgacaacacaggcggtcaccactaaatgaaataaaattagatgccaaatcagtt
gaagagccagacaggaagccacaggctgaacagagcattatgggtagtgtagtttcatca
ctaccagccatggctattgctagtgctgcaccactcctaataaaagccgctgaagttctt
tctgaaacttcaccagaacaaagtaatgatatgtccttgtgtgcatcagtgtctcaggaa
atggcaggaaacaatatcctgacagaacaggaagtggaccaggacagcacagttcaggac
gtatcagcaatcgaggaaacagatgatagcagcaccaaaaagcagagtgcacaagatgta
caaaacaagctagttttagatgaaaatggaaaaatggtggaagaagaagatgtgagggat
agtgaaacagagagagaggaagagagaggtgaagaagagagtctcgctgaggaagaagat
gaaagtgagggagttgggcagaaagaagagggcagtactgttgaagatgaagaaagagag
agcgataatgatgaagagagtgacagtgctcaaaaaggagaggaggacggtgaggaagag
gagggagaagaagaggaaagtgaggcagcaggagaggaagaggatgacagcaatagcaga
caaagcggtaaaagtgaaggagaaggaagaggagatgagactgaaagagaagaagaggag
agtgagggacaagtgaaagaggagggcgaggatggagaaatggaggaagaggagaataaa
gacgaagagagcggtggtgaagatgaggaagaagagagtgagagctgggatgaagggagt
gagggagaggtggaagacgaggagaaaaccgatgcagaagaggagcaggaaggagagagc
agtaacgaggagaaaatggaagtaggtgaacaatctgacagtgaggatgaaaataaaaat
gtgagatccgatgaagaggaaggagagagtgaagaaaaggatgggagtgaagaagaagaa
gaggaagagaatgaaacagcggaaggagagggagaacaggaagaaaaggaagatgaagag
agtgaggaagaagatgaggtaggaaatgaagatgaggaggaaaatcaagatgaagagact
gaccatgaagaagaggagggaaacagagaccaggaggaggaagaagaagagaatgacgaa
caggaagaggatgaagaagacaaggaggaggaagtggatgaagaggaaaataatgaagaa
ctgaaatacaaaaaagatggagccataaacagtgaagaagaggagggagaggaaagtgtg
agagagaaagaagaacaacagaatgaggtggaagcagatgcagatgaagatagagaaaga
caagaagggagtgaacagattgaggaagaggatgaagaaaaagaagagggagagaaagaa
ggggaaatggatacaagtgaagtgaaatttagagaagaagagaatctggatatctcagag
acacaggaagaggacagaggagatgaagacgatgaggtgaacaagccgaatgaaataatg
gaagaaaataacgaggaagagtgtggaagtgagaaagaagcagaaacagaagaagaagaa
acagacaagaaggaagagaacaaaaaaacagacagaggtggggagaaacagacagaaact
aatgaggaagaagaggaggatggtgaagaagaggaggaagaaacagagcagacagaaaat
aatataaaatcagagataaaccggaaacagaaagaatctagtgaagaggaagaagaacat
gaagagagtgaggaagaagaggaggagaaggaggaggaagcagagcagaaagaaataaaa
cagagagaaactagtgaagaagaacaggaagaagagagtgaggaagaggaggaggaggaa
gcagagtggaaagacatgaatataaaaactgagaaaaacaggataaagcagcgagaaaca
agtgaagaagaagaacaggaagaagagagtgaggaagaggaggaggaggaggaagcagag
cagaaagaaatgaatataaaaacagagaaaaacaggatgaaacagagagaaacaagtgaa
gaagaagaacaggaagaagaaggtgatgaagatgaggaggaagaggaggaagaagaaata
gagaagaaagataaaattgggaggaaacagacagaaactactgaaggagaagaagaagaa
gaagaggaagaagaaggtgatgaagatgaggaggaagagggggaggaggaagaaatagag
aagaaagataaaattgtgaggaaacagacagaaactactgaaggagaagaagaagaagaa
gaagaacaggaagaagaaggtgaggaggaaggtgaggaagaagaggaagaagaaggtgaa
gaagaagaagaagaaggtgaggaagaaaagaccaaaaaagtaccaaaacagagagccaaa
ctgaacgtgttacctgcccacagacagacaaatgcacagagagacggacagaagactaga
caaagagatcaacagaatgttaaagggaagaagcaagcagatagtggtgctcaggaccct
cagttctggaacagtgtcctaccacagtatctaaaccttaaatga
DBGET
integrated database retrieval system
