Ctenopharyngodon idella (grass carp): 127524103
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Entry
127524103 CDS
T08802
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127524103
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127524103
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
BshC
Pyr_redox_2
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
127524103
NCBI-ProteinID:
XP_051771424
LinkDB
All DBs
Position
12:29039787..29050815
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AA seq
572 aa
AA seq
DB search
MGDMVLTADLPERSMGSHKLKQKESNLKSTEEEKKIQVNGSPETEGEKDSKITEESKIQE
DLQESEDPQKPQDEEQELGPDEVACDSCIDRPCRAKKSCLTCMVSYCEAHLRPHLENVKF
QSHKLVEPLRDIERRTCETHRGPLELYCCADALCLCQECASEEHRGHNAVPITEARRKIE
KELHDKQTDMMKTVTAAENAINKLQVNTVSIEASVKEVRGVIEEQFDTLLSAVEQVKKEV
SEILEAEERQALRQAEGIRVHLEQRCTELKKTQSRVEKITKNKHDIDFLQEYSEWKKEAV
DVSLPGVYIGLMDRLQLFSRVVTQSTKEMCANLLTSYTNKLKDTFKNDNMGIKTTVYAMI
AARQNMSIPNPKTRDDFLKYVTPLNLDADTAHQFLRLTEERKKVTNTTPWQHSYPELPER
FEHFKQVLTVESFYLGRHYFEVDMRGEGTHVGLTYKSIDRKGSESNCCITGNSFSWCLQW
NGRSFSAWHSDVETPLSSPKATRIGVYVDYPGGELAFYDVENDMTLIHKFQAQFLEPLYP
AFWLPKKENVVLLEPTGASSSLRTPSPVSSPK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacatggtgctgacagcagacctcccggaacgcagcatgggttcacataaactc
aagcagaaggagagcaatctgaagtctacagaggaggagaagaagattcaggtgaatgga
tctccagagacagaaggagaaaaggacagcaagatcaccgaggaaagcaagattcaagaa
gacctccaggaatcagaggatcctcagaagccccaggatgaagagcaggagctaggacca
gatgaggtcgcgtgcgactcctgcatagaccggccgtgccgggccaaaaagtcctgcttg
acctgcatggtgtcgtactgcgaggctcacctgagaccgcacctggagaacgtgaagttt
cagagccacaagctggtggagccgctgcgggacatcgagagacggacgtgtgagactcac
cgcgggccgctggagctgtactgctgcgcggacgcgctctgcttgtgtcaggagtgcgcg
tcagaggaacaccgcggacacaacgccgtgcccatcactgaggcgcgcaggaaaatagag
aaagagcttcatgacaaacagacagacatgatgaagacggtcacagcagcagaaaacgcc
atcaacaagttacaggtcaacacggtgtctatagaggcgtctgtgaaggaggtgcgagga
gtgatcgaggagcagttcgacacgctgctgtcggccgtggagcaggtgaagaaggaagtg
agcgagatcctggaggcggaggagcggcaggcgctgcggcaggccgagggaatccgagtt
catctggagcaacgctgcactgaactaaagaaaactcagagtcgagtcgagaaaatcacc
aagaacaaacatgacattgacttcctgcaggagtattcagagtggaaaaaggaagctgtt
gatgtgtctttacctggtgtttatatcggcctcatggatcgactgcagttgttcagtcgt
gttgtcacacagtccacgaaagagatgtgcgccaacctgctgacctcgtacaccaacaaa
ctcaaagacacctttaagaacgataacatgggcataaagacgacggtttatgccatgatc
gctgcaagacagaacatgtcaattccgaatccgaagaccagagacgacttcctcaaatac
gtcacgcctctgaacctcgacgcagatacggcccatcagttcctgcgtctgacagaagaa
cggaagaaggtcacgaacacgacgccgtggcagcacagctatccggagcttcccgagcgc
ttcgagcacttcaaacaggtgctgacggtcgaaagcttctacctgggccgccactatttc
gaggtggacatgagaggagagggcactcacgtcggcctgacgtacaagagcatcgaccgc
aagggctccgagagcaactgctgcatcacgggaaacagcttctcctggtgcctgcagtgg
aacggacgcagcttctccgcgtggcacagcgatgtggagacgccgctcagcagccctaaa
gccacacggatcggcgtgtacgtggattaccccggcggcgagctggcattctatgatgtg
gagaacgacatgacgctcatccacaagttccaggctcagtttctggagccgctttaccct
gcgttctggcttcccaagaaggagaatgtggttcttctggagcccacaggagcttcatcg
tctctgaggaccccgtctcctgtttcctctccaaaataa
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