Ctenopharyngodon idella (grass carp): 127524508
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Entry
127524508 CDS
T08802
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127524508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127524508
03016 Transfer RNA biogenesis [BR:
cide03016
]
127524508
Enzymes [BR:
cide01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
127524508
Messenger RNA biogenesis [BR:
cide03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
127524508
Transfer RNA biogenesis [BR:
cide03016
]
Prokaryotic type
tRNA degradation factors
127524508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
127524508
NCBI-ProteinID:
XP_051772009
LinkDB
All DBs
Position
13:complement(29688734..29716187)
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AA seq
763 aa
AA seq
DB search
MSVMMRCVMKARLGWVRLAAVRGFHERTVAVSLGERRLEISTGKLARFADGCAVVRLGET
SVMVTAVSKSKPASALFMPLVVDYRQKAAAAGRIPTNYLRREMGSTDSEILTSRLIDRSI
RPLFPTGYFYDTQVLCNILAADGVNDPDVLAINGASAALALSDIPWNGPIGAVRVGLVDG
EFIVNPTRSEMNGSTLNLVIAGAPSSQVVMIEAAAENILQQDFSHAVKMGVKHTQQIIQA
IQQMSREMKVTKRTPAKLFTASAEMVDFTRQLTSDRIYAVFTDFTHDKTSRDEAINKIRL
EAEEQIREKFPQAEAFGVVEAFNSVSREIFRNLVLHEYRRCDGRDLTSLRNISCEVDVFK
PLHGSALFQRGQTQVLCTVTFDSLESIMKTDVITTALSGIKDKNFMLHYEFPPYATNEIG
RMGGMNRRELGHGALAEKALRPVIPADFPFTIRVTSEVLESNGSSSMASVCGGSLALMDA
GVPISSAVAGVAIGLISKASPEKPSEIQDYRLLTDILGIEDYNGDMDFKMAGSSKGITAL
QADIKIPGLPLKIVMEAIQQATVAKREILGIMNKSISKPRSSRKENGPVVENISVPLSRR
ARFVGPGGFNLRRLQAQTGVTISQVDEETFSVFAPTPSAMNEAQEFIRDICKDDQEQQLE
FGSVYTATITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLEVGQQIQVKYFG
RDPTDGRMRLSRKVLQSPAAAVVRSLSDRHSISIGAGEQIPDP
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatgatgaggtgtgtgatgaaggctcggctcggctgggttcggctcgctgct
gtcagaggctttcatgagcggactgtagctgtgagtttaggggaaaggaggctggagatc
tccacggggaagctggcacgcttcgctgacggttgtgctgtggtcaggttgggcgagacg
tcagtgatggtgacagcagtcagcaagagcaaaccagcctctgctctcttcatgcctctt
gttgtggattacaggcagaaggcggcggctgcaggacgaatccccacaaactacctgagg
cgagagatgggcagcacagactctgagatcctgaccagccggctgattgatcgctccatc
aggccgctgtttcccaccggatacttctatgacacacaggtgctgtgtaacatactagct
gctgatggagtcaatgaccctgatgttctggccattaatggagcatctgcggctctggct
ctgtctgatattccctggaacggccccatcggtgcggtgcgtgtcggcctggtggacgga
gaattcatcgtcaatcccacgcgctcggagatgaacggcagcacgctgaaccttgtgatc
gccggagccccgtccagccaagtggtgatgatagaggctgcggcagagaacatcctacag
caggacttcagtcacgcggtgaagatgggtgtcaaacacacgcagcagatcattcaagcc
attcagcagatgagccgagagatgaaagtgaccaaacgcactcctgccaaactcttcact
gcctcagcggagatggtagatttcacacgacagttgacgtctgataggatctacgctgtg
tttacagacttcacacatgacaagacatccagagatgaagcgattaataagatccgtctg
gaggccgaggagcagatcagagagaagtttccgcaggcggaggcgtttggggtggtggag
gccttcaacagcgtctccagagagatcttcaggaatctggttcttcatgaatacagacgg
tgtgatggaagagatcttacgtctctacgcaacatctcctgcgaggtggacgtgtttaag
ccactccacggctcagctctcttccagaggggtcagacacaggtgctgtgcacggtgacc
tttgactctctggagtccattatgaagactgacgtgataaccacagcgctcagtggaatc
aaagacaagaacttcatgctgcactatgaatttcctccatatgcaaccaatgagatcggg
aggatgggaggaatgaaccgacgggagctcggtcacggagcactggcagagaaagctttg
agacccgtcattcctgcagactttcccttcaccatccgtgtgacgtctgaggtgctggag
tccaacggatcctcctcgatggcgtcggtgtgtggaggaagtttagcactcatggacgca
ggtgtgcccatctcctcagctgtagccggcgtcgccatcggcctgatctctaaagccagt
cctgagaagccgtcagagattcaggactacagactcctgactgatattctgggaatagaa
gactacaacggagacatggacttcaagatggcagggagcagcaaaggcatcacggctcta
caggctgatattaaaatcccaggacttcctctgaagatcgtgatggaggccatacagcag
gcgacagtggccaaaagagagattctaggcatcatgaataagagcatttccaaaccccgg
agctccaggaaggagaacgggccggtcgtggagaacatcagtgtgcctttatctagacga
gcgcggtttgtcggtccaggaggatttaatctgcgcagactgcaggctcagacaggtgtg
acgatcagtcaggtggacgaggagacgttctccgtgtttgctccgacacccagtgccatg
aacgaagcccaggagttcatccgtgacatctgtaaagacgatcaggagcagcagctggag
tttggatccgtttacacggccaccatcacagagatcagggacattggcgtgatggtgaag
ctgtatcccaacatgagcgccgtcctcctacacaactcacagctggaccacaaacggatt
aagcatcccagcgctcttggactggaggtcggccagcagatccaggtgaagtatttcggt
cgggacccgacggacggcagaatgagactctcccgtaaggtgcttcagtctccggcagcg
gcggtggtgaggagtctgagcgacagacacagcatctctataggagccggcgagcagatc
ccagacccctag
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integrated database retrieval system
