Ctenopharyngodon idella (grass carp): 127525155
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Entry
127525155 CDS
T08802
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127525155
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
127525155
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
TF_Zn_Ribbon
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
127525155
NCBI-ProteinID:
XP_051773458
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Position
13:14434580..14482433
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AA seq
672 aa
AA seq
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MRRCKNCGGTDIDVDQARGDAVCMGCGSVLEDNIIVSEVTFVENSGGGSSAVGQFVAGDS
SGTVPSLGGNFHTGVGRESRAATLQNAKRQINHLGHQLQMNQHCLDTAFNFYKMALCKHL
TRGRKSSHVIAACLYLVCRTEGTPHMLLDLSDILQVNVYVLGKTFLVLARELCINAPAID
PCLYIPRFAQMLEFGEKSHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHEF
RRTIKEVISVVKVCEATLRKRLNEFEDTPTSELTIEEFMRVDLEQECDPPSYTAGLKKEK
LKQIELELAKKVDDIEGEICGYQDEIEVELESCRPKARGFYASCSKEDDVISLASSSVLV
GDDEGEDDELRAAASHLCSTVCGEDGGGNEQERDREKATPTKRPSLALLLGALPTAASLG
LPESITKMGEEKENDVEAENGELDLSGIDEDEIDRYILNEKEVKVKTELWMLQNADYLKE
QKEKEERIAKEKEEGTYKERKPRKKSARRREPINASTADEAIEKMLEQKRISTKINYDVL
KDLNKSSLKSPTRHPEEASTGAKSTPTARQRKPQLTSPSIGKTISSFGKRLQPLVCAQPS
KKLALDQKGSGAPVAIPAAPTQNATVVESGPVAYEDPADEEEEDEEDEHCVSAVQLMGST
DYGYELDDDDGF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggtgtaagaattgtggggggacggacattgatgtggaccaggcacggggtgat
gccgtgtgcatgggctgcggctccgtgctggaggacaacatcatcgtttccgaggtaacc
ttcgtggagaacagtggaggaggatcgtccgccgtggggcagtttgtcgctggtgactca
tctggaactgtgccatcattgggaggaaacttccacactggggttgggagggagtccaga
gctgccactctacagaatgctaagcgacagataaaccatcttggtcatcagctacaaatg
aatcagcactgtctggacactgccttcaacttttacaagatggcactctgcaagcatctg
accagaggacgcaaatcatcccatgtcatcgccgcctgcctctacctcgtctgccggaca
gagggaacgcctcacatgctgcttgacttgagtgacatcctacaggtgaacgtgtatgtt
ttggggaaaacattccttgttttagccagggagctgtgcatcaacgcaccagctatcgat
ccgtgtctttatatcccgcgttttgcgcaaatgctggaatttggagagaagagccacgag
gtttcgatgacggcactgcgtctcctgcagaggatgaagagagactggatgcacacggga
cgaagaccttcaggcctctgcggagcagctctcttggttgctgcccgaatgcacgagttc
cgtcgcacaattaaggaagtgatcagcgtggtgaaagtctgtgaggccacactgaggaaa
aggctgaatgaatttgaggacacgcccaccagtgagctgactattgaagagttcatgagg
gtggatctggagcaggagtgcgacccgccctcttacacggctggacttaagaaggaaaag
ctaaaacagattgagttggagcttgcgaagaaagttgatgacattgaaggtgaaatctgt
ggctatcaggatgagattgaagtcgagctggagagctgtaggcccaaagccaggggattt
tatgcatcctgctccaaagaagatgatgtgatttccttggcatcatccagtgtccttgtc
ggtgatgatgaaggagaggacgatgagctgagggcagcagcgtctcacttgtgcagtact
gtatgtggagaggatggaggtggcaatgagcaagagcgagatagagagaaagccactcca
accaaacggccctcgttagcattattgcttggagctttgcccactgctgccagtttgggc
ctgcccgagtccatcaccaaaatgggagaggagaaagagaacgatgtggaggcagaaaac
ggtgagctagacctgagcggtatcgacgaggacgagatcgatcggtatatcctgaatgag
aaggaagttaaggtgaagactgaactgtggatgctacaaaatgcagactacctcaaggaa
cagaaagaaaaggaggaaagaatagcaaaggaaaaggaggagggtacatataaagagcgg
aagcctagaaaaaagtcagcacggaggcgtgagcccatcaatgccagcactgcagatgaa
gccattgaaaagatgttagagcagaaacgcatctccactaaaataaactatgatgtcctg
aaagacttgaacaaatccagcctaaaaagtcccactcgccatcctgaagaagcttccact
ggagccaaaagcacccccacggcccgccaacggaaaccccaactgacttcacccagtatt
ggcaaaactatcagcagttttggcaagaggttacagcccctggtgtgtgcgcagccctct
aagaagctggccctcgatcagaaagggtctggtgctccagtggccattcctgctgcccca
acccagaacgctactgttgtagagagcggaccggtggcgtatgaagaccctgcagatgaa
gaagaggaggatgaggaggacgaacactgtgtcagtgccgtgcagttaatgggcagcact
gattatggttatgaattggatgatgatgatggcttctga
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