Citrobacter sp. FDAARGOS_156: AL515_11410
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Entry
AL515_11410 CDS
T04313
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cif
Citrobacter sp. FDAARGOS_156
Pathway
cif02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL515_11410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cif03021
]
AL515_11410
Transcription machinery [BR:
cif03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AL515_11410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PCI
PP1_inhibitor
HTH_24
HTH_36
HTH_11
HTH_28
HTH_7
HTH_3
TnsD
GerE
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AMH14426
LinkDB
All DBs
Position
complement(2464494..2465015)
Genome browser
AA seq
173 aa
AA seq
DB search
MSDRATTTACFTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMGSDSLKTVRD
PRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPENLAPSPEERESQLETLQLIDSMLDG
LNGNTREAFLLSQLEGLKYSEIALKLGVSVSSVKKYVAKAIEHCLLFRLEHGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgcgccactactaccgcttgcttcacgttcgagtcgctttatggcacacat
cacggctggctgaaaagctggctgacgcgcaagctccagtctgcctttgatgctgatgat
attgcccaggacacatttttacgggtaatgggcagtgactcgctcaagactgtccgcgac
cctcgttccttcctgtgtactattgccaaacgggtgatggtcgacctgtttcgtcgaaac
gcgctggagaaagcctatctggagatgctggcgctgatgccggaaaatctcgcgccttcg
cccgaggaacgtgagagccagctcgaaaccctgcaactcatcgacagcatgcttgacggc
ctgaacggaaacacacgcgaagcgtttttgctttcgcaactggaggggctcaaatacagc
gagatcgcgcttaagctcggcgtctccgtcagctcggtgaaaaagtatgtggcaaaggct
atcgaacattgtctgctgtttcgtctggagcacggcctgtga
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