Chryseobacterium sp. IHB B 17019: ATE47_08815
Help
Entry
ATE47_08815 CDS
T04193
Name
(GenBank) endonuclease
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
cih
Chryseobacterium sp. IHB B 17019
Pathway
cih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATE47_08815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_08815
Enzymes [BR:
cih01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ATE47_08815
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ATE47_08815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
DpnI
zf-C4_Topoisom
NFACT_N
OrfB_Zn_ribbon
DNA_ligase_ZBD
HMBD
Motif
Other DBs
NCBI-ProteinID:
ALR30619
LinkDB
All DBs
Position
1908785..1909519
Genome browser
AA seq
244 aa
AA seq
DB search
MPEGPSILLMKESLQKFVGKKVVKADGNAKFEKDPLEGKTLLEIRTFGKQTYLIFDDISV
RIHLLMFGSYSVDEQTKPDQSLRLSLQFKMGSMYFYTCSVKLIETKDLEKIDWEADVLSN
EWNPKKAEKKLKSNPEMMVCDALMNQDIFSGVGNIIKNEVLFRIGVQPESLLGKMPAKKI
KELIAEARNYSFDFLKWKREFTLKKHWLAHTKSTCPICGEKLIKKQTGKGKRRSFYCEKD
QKLY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggtccatccatactattaatgaaagaaagcctgcaaaaatttgtaggtaaa
aaagttgtgaaagccgatggaaatgcaaagtttgaaaaagatcctttggaagggaaaacg
ctattggaaatccggactttcggaaaacaaacttatctgatttttgatgacatttctgtg
agaatccatttgctgatgttcggttcttacagtgttgatgagcagactaagcctgatcaa
agcttacgtttatcattacaatttaaaatgggaagcatgtatttttacacatgttccgtt
aaattaattgaaacaaaagatctggaaaaaatcgattgggaagccgatgttttaagtaac
gaatggaatcctaaaaaagccgagaaaaagttaaaatccaatccggaaatgatggtttgt
gatgctttaatgaatcaggatattttttcaggagtaggaaatattattaaaaatgaagtt
ttattcaggattggagttcagccggaaagtttgctgggaaaaatgcctgcgaaaaagata
aaagagcttattgccgaagccagaaattacagctttgatttcctgaaatggaagcgcgaa
tttactctaaaaaaacactggctggcacacaccaaatccacctgccctatttgcggtgaa
aaactgattaaaaagcaaaccggaaaaggaaaaagaagaagcttttattgtgaaaaggat
cagaagctatattaa
DBGET
integrated database retrieval system
