Corynebacterium ihumii: CIHUM_10550
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Entry
CIHUM_10550 CDS
T09115
Symbol
nei2
Name
(GenBank) Endonuclease 8 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cihu
Corynebacterium ihumii
Pathway
cihu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cihu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIHUM_10550 (nei2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cihu03400
]
CIHUM_10550 (nei2)
Enzymes [BR:
cihu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CIHUM_10550 (nei2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CIHUM_10550 (nei2)
DNA repair and recombination proteins [BR:
cihu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIHUM_10550 (nei2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Fapy_DNA_glyco
HscB_4_cys
Auto_anti-p27
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WCZ35498
LinkDB
All DBs
Position
2179100..2179891
Genome browser
AA seq
263 aa
AA seq
DB search
MIHRLARRFNADFRPAPIAASSPQGRFEPSLIDGTALTHASAHGKHLFLQFTDATVHVHL
GLIGKFSFEPADTLRGQIRLRLVPDGGAGDTAAHLRGPQKCAYITPAEQQAILDAAGEDP
LSPAADPDSLFERVRRSRRTIGSLMMDQAYFAGVGNIYRAEPLFRQGISPFAPGRELGRE
RFDAIWSDLVSLMAAGVATGRIDTVRPEHAPEAMERAPREDDHGGEVYVYRRAGEPCYVC
GHPVEKQQFEGRNLFFCPSCQAL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgattcaccggcttgcgcgccggttcaacgcggacttccgccccgcgccaattgccgcg
agctcgccgcaggggcgcttcgagccttcgcttatcgacggcactgcgctcacccacgcg
tcagcccacggcaaacacctgtttctgcagttcacggacgcgacagtgcacgtgcatcta
gggctgattgggaagttttccttcgagccggcggacacgctgcgcggccagatccggctg
cggctggtgccggacgggggagcaggcgataccgcagcgcacctgcgcggcccgcagaaa
tgcgcctacatcaccccggcggagcagcaagcgatccttgacgccgcgggcgaggacccg
ctttctcctgcggcggacccggactcgctgttcgagcgggtgcggcgctcccggcgcact
atcggctcgctcatgatggaccaggcttacttcgccggcgtgggcaacatctaccgcgcc
gaacccctgtttcgccagggcatttccccgtttgctccgggccgggagctggggcgcgag
cgtttcgacgccatctggtccgacctggtttcgctgatggccgcgggcgtggccaccggg
cgcatagacacagtgcggcccgagcacgcgccggaggcgatggagcgcgccccgcgcgag
gacgaccacgggggagaggtttacgtgtaccgccgcgccggcgagccctgctacgtgtgc
gggcacccggtggaaaagcagcagttcgagggccgaaatctgttcttctgcccgtcctgc
caggcgctttag
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