Carya illinoinensis (pecan): 122279356
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Entry
122279356 CDS
T08745
Name
(RefSeq) pumilio homolog 5-like
KO
K17943
pumilio RNA-binding family
Organism
cill
Carya illinoinensis (pecan)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
Motif
Other DBs
NCBI-GeneID:
122279356
NCBI-ProteinID:
XP_042945905
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Position
1:complement(48140565..48149651)
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AA seq
1019 aa
AA seq
DB search
MATESVMGMVESSRVRKWTSSKDAAAFGFPLQNMAAEQLGLLLEGQRFLGDELSMVPNRS
GSAPPSMEGSLASIKNLLMQHNSHTNSNLANLSAVPEEQLKFDPAYSACSSSKIKLNPRI
PPPPISQENQCLVHQMGFSGNNAGLISVDDSCSGPLHLSQGSLSPHMEESEDDTSPRPAS
NNLAESSTALMPGQNSVSLRSRRKSLVDLIQEDFPRTPSPVYNQSHSSGHATTDGSFDSD
VHAISANVSSIDASKLLESNLGSTDVFSESCALDPRAVGVTVNSNPSMTTFSSSSCPDAR
GSPLMREYNELSNNDSGLKDDVSFSGGTLRSDISKMKAKGIASNAESDGKKQEERWNMAQ
QHPSAQGGIPHQVQGIEAQVCSEGMSNSHGVTEKAPHDPNFSSVDIQSSLHSHGFVPPLY
ATMTSGHPYYPNFYPSGLFPSQYGVGGYGLSSVPLPTYMAAYPSHGVMPLPFDPASAPSF
SGQTAGALTGECTLLAGDVQNLGKFYGPHGLMLQPSFVDPHQMLYYPHYFDNAYSTVFHS
QLASTGIVGGQDNPWSTVASYMSNQKFQPQTNQSIPGPREVGNASGRYFPTSPNLDVMAK
FPASPIPSSLYPSSPVGGMSHLGQHSEMRLPRSSIKNSGQYSERQGQRRLNSFVEPKGHS
LLEELKSSNVRKFELSAIAGHIFEFSIDQHGSRFIQQQLEHCSVEDKASVFKEVLPHAST
LMIDVFGNYVIQRFLEYGSLEQRKELADQLVGHMLALSLQMYGCRVIQKVLEVIEPDHKI
QLVRELDGHVMRCVHDQNGNHVIQKCIESVPTEKIEFIISAFQGQVAKLSTHPYGCRVIQ
RILEHGSDELQIQCIVNEILDSAYVLAQDQYGNYVTQHVLKMGKPYARSQIIKSFTGAVV
HMSFHKYASNVVEKCLEHGDTTERELLIGEIIGQSEDNDNLLTMMKDQFANYVVQKILET
SSDKQREILLNRIRLHLHALKKFTYGKHIIARFEQLSGEEIQSLEEEQGTLQRDSRSSK
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgagagtgttatgggaatggtggaaagcagcagagttagaaagtggacctct
tctaaggatgctgcagcttttggattcccattacaaaatatggcagcagagcagttggga
ttactcttggaggggcaaagatttcttggagatgaacttagcatggtgcctaacagaagc
ggtagcgctccaccaagcatggaaggttcacttgcatcgattaagaatcttttgatgcaa
cataactctcataccaattcaaacttggctaatttaagtgctgtgccggaggaacaacta
aaatttgatccagcttattctgcatgctccagctctaagatcaagttgaacccaaggatt
cctccacctcctatctcgcaagagaatcagtgcctagtgcatcaaatgggtttttctggc
aataatgcaggattaatttctgttgatgatagttgcagtgggcccttgcatttatctcaa
ggctctctttctcctcatatggaggagtctgaggatgatacttcacccaggccagcttcc
aacaatttggctgaaagtagtactgcacttatgcctggacagaactcagtatctttgcgt
agccgtcgcaaaagtttggttgatctgattcaggaagactttccccgtacaccttctcca
gtttataatcagtctcattcatctggccatgcaacaaccgacggatcgtttgattctgat
gtccatgcaatttcagcaaatgtctcttccattgatgcttccaagctattggaatcaaac
ttaggctctactgacgttttttcagagtcttgtgctctggatccacgtgctgttggagtg
acagtaaatagtaatccttcaatgaccactttttcaagctcaagctgtcctgatgcgaga
gggagcccattaatgcgagaatacaatgaattaagcaataacgattctggtttaaaggat
gacgtatcatttagtggtggtaccctcaggtcagacatctccaaaatgaaggccaaaggt
atagcatctaatgcagagagtgatgggaagaaacaagaagagcgatggaatatggcacaa
cagcatccctctgctcaagggggtattccacatcaagttcagggaatcgaagcccaagtt
tgttctgaaggaatgagtaattctcatggtgtcaccgaaaaagctccgcatgatcctaat
ttttcttctgttgacatacagtcttcattgcattctcatggatttgttcctcccttatat
gcaacaatgacgtcaggacatccatattaccctaatttttatccatcagggctgtttcct
tcacaatacggtgttggggggtatggtctgagttcagtgcctcttcccacatatatggct
gcatacccctctcatggtgtgatgcctctgccatttgatcctgcttctgctccaagtttt
agtggtcaaactgctggtgctttaacaggggaatgcaccctacttgcaggtgatgtgcaa
aatctagggaaattttatggacctcatggattaatgcttcaaccttcttttgtggatcct
catcagatgctttattatccacattattttgacaacgcatatagcactgtattccattct
cagttggcatcaacaggtattgttgggggccaggataacccttggtcaactgtggcctct
tatatgagcaatcagaaatttcagcctcagacaaatcagagcattccaggtccaagagaa
gtgggaaatgctagtggtcgttattttccaacttctcctaacttggatgtcatggcgaaa
ttccctgcatcacctattcctagttcattatatccatcatctccggttggcggaatgagt
catcttggtcagcatagtgagatgaggttacctcgaagttctataaaaaattctggacaa
tattcagagaggcaagggcagagaagactcaacagctttgttgagcccaaagggcactct
cttcttgaagaactgaaatccagcaatgttcgaaagtttgaactctctgctatcgcaggg
catatttttgaattcagtattgatcaacatgggagtcgatttattcagcaacagctggaa
cattgcagtgttgaagacaaggcatctgttttcaaagaagttcttccacatgcttcaaca
ttaatgatagatgtttttggcaattatgtcattcaaaggtttcttgaatatggaagtctc
gagcagagaaaggaacttgcagatcaacttgttggacatatgttggctttaagtttgcag
atgtatggttgtcgtgtaatccagaaggtccttgaagttattgagcctgatcacaaaata
caacttgtgcgtgagcttgatggacacgttatgagatgtgtacatgatcagaatggaaat
catgttatccaaaaatgtatagaaagtgtccctacagagaaaattgaatttattatctca
gcttttcaaggtcaagttgccaagctttctactcatccctatggttgtcgtgtcattcag
agaattctggagcatggttcagatgagctgcagattcaatgcatagtgaacgaaatcttg
gactctgcttatgttcttgctcaagatcagtatggcaattatgtcacgcagcatgttttg
aagatgggaaagccctatgcaagaagtcaaataatcaaaagctttactggggcagtcgtc
cacatgagctttcataaatatgcttcaaatgtcgtcgagaaatgtttggagcatggggat
actactgaacgggagctcttgatcggagagattattgggcaatctgaggacaatgataat
ttattgacaatgatgaaggaccaatttgcaaattacgtggtccagaagattctcgaaaca
agcagtgataaacaacgggaaatattactaaatcgtataagacttcatcttcatgctttg
aagaaattcacctatgggaagcacataattgctcgatttgaacaactatctggtgaagaa
atccaatccttggaagaagaacaaggtactctgcaacgggacagcaggtcgtctaagtga
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