Carya illinoinensis (pecan): 122282945
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Entry
122282945 CDS
T08745
Name
(RefSeq) protein MODIFIER OF SNC1 1-like isoform X1
Organism
cill
Carya illinoinensis (pecan)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
122282945
NCBI-ProteinID:
XP_042950967
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All DBs
Position
11:3990743..4003321
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AA seq
1672 aa
AA seq
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MTSSMLSGERRWATSTRRGGKTVLGKVAVPKPINLPSQRLENHGLDPSVEIVPKGTHSWG
SRPSSSTSNAWGTVSPGTEGGTGSPSHLSGRPSSGGSNTRPSTSSSDRAHEPNANAWGPN
SRPSSASGALTSNQTLLTSLRPRSAETRPGSSQLSRFAEPLPENTGAWGAAGTPEILGAM
ASKNDGFSLSSGDFPTLGSEKDNSGRNIDSQDHSSHGRPVSSSGGVALPKEGNGASIVGD
VSVDANVKSGNANSWRRDKCEDAVPSGVEKWQTDPQPYPNPSIPHHFEAWHGPPVTNPPG
GVWFRGPPGGHPYGPPVGPGAFPMEPFPYYRPQMPATTLANPQPGPPPGGGPRGHHPNNG
DLYRPHMTDAYIRPGMPIRPGFYPGPVAYEGYYGGPMGYCNSNDRDVPFMGMASGPPVYN
RYSTQNAPEPSSSQGRSGGYGSAGKTMVPEHMESGRPHDTRGPYKVLLKQQNGWDGRNKE
RKWEGTISTDAAYIEKADQPGMSSWENDWRSDYRNDVEISLRQMTPSQEISSQTCDDRRS
SVPVKVNSPKSVGNMKVSDDIPASNLECASSGSPEIPGSVSAVPKDSTLIKKIEGLNAKA
RAADGQHNIASVSSWEGQKKKFSVHNAKASHPADEGGRGFVYAERIHATGITNPASRETG
VSVGDKSLESMAAGGTTISRSIHDMQGRGGNHGKGGHNGLEVDGWRKKAQVMETSVVSAS
RSDTNSTVFVHDHHTSFEASKKSLQFPRAREERESAPPVFDPSDNQAQHTKLRELEQRAK
QLREEEEEERTRKQMAKVPVFDPSDNQAQHTKLRELEQRAKQLREEEEERTRKQMAKAPV
FDPSDNQAQHTKLRELEQRAKQLREEEEERTRKQMAKARAKLEDLDRRKQSMKGPTQKSE
ASSDAMQSSEGSTSRVVQSPDLSSELPPEKPKSVNKEFVVQNQSVSFQHGADSADVTRHN
NAPHIQDGDAPRQKRNGYREKQSLEKNSNVKSISTSNNEAPKNHTDASGKITVSVGEVAI
EIAPSCQSNLPLNSNAVPGSSSFPMNANAMTESSVSQRKKNNKGGKNKHKVEVASSVATS
QSLEAKEPNLVNASLELGKPIVFQTELDSNSVQSVTISKDENQLFEHQSSLPSEDSHGRA
NSQWKAQHSRRMSKNSQLNRSAEKFHGDAVWAPVGSQNKADADEASHKNVVEAITPFMKI
DHQAQGNPKNKRAEIERYIPKPVAKEMAQQGSIQQLVASSGNQTTSDEVIEGADSSPGTK
NSQPAGSAVGKVGLAFESRNRDGRQNKQGRAHGSWRQRGSTELVGVQSLQDGPSYPGQNV
QNPVKDYQTQKLDVGLVKEQQTYSDEWNAPDGGNIPDNSDSVAHVAVTAITDQGVTGRAK
RLPLKGHKGMGNNNGLDQKECSSGDADKIDTQSSSLEMSHIHLPTTSKDNRGTGERSTAH
WQPKSQTFPANSQGSRTNSVRSGGPGVVWTNKKESTPQGATVPLTPLHDKRTGEGVSPPC
HDQFPSKKVDAEEALGAGGHREAKRGKKVGSLKGRPHSPNLVPVSPVEQAPGSMDVRQEQ
RSSSGFRKSGNQNNNRFSRLHESRGDWNSSGHDSKHNNPSSNWDRQRPNSHYEYQPVGPD
NNNKSNIAEGPKDGIPNTGPRFRERGQNHSRHGGGRFYGRQGGTDRVDADYE
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaagtatgttgagtggagagagaagatgggctacttctacaagaagaggtggc
aagacggttttggggaaagttgcagttccaaaacccataaacttaccgagtcaaaggttg
gaaaatcatggtctggacccaagtgtggaaattgttcccaagggcacccatagctgggga
agtagaccatcttcttccacatcaaatgcctgggggacagtgtctcctggaactgaaggt
ggtacaggttcaccaagccatcttagtggccgtccttcatctggcggaagcaacacaagg
ccatcaacttccagtagtgatagggctcatgaacctaatgctaatgcatggggcccaaac
tctagaccatcatcagcttctggtgcattgacttctaatcagaccttgctgacatcattg
cgccctcgcagtgcagaaactagaccgggtagctcacagttatcccggtttgctgaacca
ttgcctgaaaatacaggggcatggggtgctgctgggactccagagatattgggggcaatg
gcatccaagaatgatgggttttctctgtcttctggagattttcctacactgggttcagag
aaagataattctggcaggaacattgactcacaagaccacagttctcatggccgacctgtc
tcatcttctggtggagtagcattgccgaaagaggggaacggggcttctatagttggtgat
gtttctgtagatgcaaatgtgaaaagtggtaatgcaaattcttggagaagagataagtgt
gaggacgccgtcccgtctggtgtggagaagtggcagactgatccccaaccgtaccctaat
cctagtattcctcatcattttgaagcttggcatggtcctccagtaactaatcctccaggt
ggtgtttggttcagaggacctccaggaggtcatccatacggacctcctgttggtcctggt
gcatttcccatggaaccatttccttattatcgtcctcaaatgccagctactactcttgcc
aatccacagccagggcccccacctggtggtggaccaaggggacaccatcctaataatgga
gatttgtacagacctcatatgacagatgcctatattcggccaggtatgccaatcaggcct
ggcttttaccctggtccagttgcatacgagggttattacggtggtccgatgggatactgc
aattcaaatgaccgagatgttccatttatgggaatggcaagtggccccccagtttataat
aggtactcgacccaaaatgctcctgagcctagcagttcacagggaagatctggtggatat
ggttctgctggcaaaacaatggttccagaacacatggaatctggtcgtcctcatgataca
cgaggaccatacaaagttcttctgaagcagcagaatggttgggatgggaggaataaagag
agaaaatgggagggtacaatttccactgatgctgcatatattgagaaggcagaccaacca
ggaatgtcttcatgggagaatgactggaggtcagattacagaaatgatgtggaaatcagt
ttaagacagatgacacccagtcaagaaatttctagtcagacttgtgatgaccgacgctct
tctgtacctgtcaaagtcaactcccccaaaagtgtgggaaatatgaaggtaagtgatgac
attccagcaagtaatttggaatgtgcatcctctggttcaccagaaattccaggttctgtt
tcagctgttccaaaagattccactctgattaagaaaattgaaggactaaatgcaaaagct
cgggctgctgacggacaacataatattgcatctgtttctagttgggaggggcaaaagaaa
aaattttcggttcataatgccaaggctagccatcctgcagatgaaggtggtaggggtttt
gtgtatgctgagagaatccatgccactggaatcacaaatcctgcctctcgtgaaactggt
gtttctgttggagataagagccttgaatctatggctgctggtggaacaaccatctccaga
tctatccatgatatgcaaggcagagggggtaatcatggtaagggagggcacaatggcctg
gaggttgatgggtggcggaaaaaggctcaagtgatggagactagtgttgtatcagcttca
cggtccgacactaattctaccgtttttgttcatgaccaccatacatcttttgaggcttct
aaaaagtctctgcagttccctcgagcaagggaagagagagaatctgctcctcctgtgttt
gatccaagtgataatcaggcacagcatactaagttgagagaacttgagcaacgtgccaaa
caactaagggaggaggaggaggaagaacggacaagaaagcaaatggccaaggttcctgtg
tttgatccaagtgataatcaggcacagcatactaagttgagagagcttgagcaacgtgcc
aaacaactaagggaggaggaggaagaacggacaagaaagcaaatggccaaggctcctgtg
tttgatccaagtgataatcaggcacagcatactaagttgagagagcttgagcaacgtgcc
aaacaactaagggaggaggaggaagaacggacaaggaagcaaatggccaaggctcgtgca
aaactggaggatttggataggcgtaagcaatcaatgaaagggccaactcagaagtcagaa
gcttcaagtgatgccatgcagagtagcgagggcagtaccagcagagttgtacaatcccct
gatttgtccagtgaactacctccggagaaacctaagagtgttaacaaggaatttgtagtg
cagaatcaatccgtgtcatttcagcatggtgctgatagtgctgatgttactcgtcataat
aatgctccccacattcaggatggtgatgccccaaggcagaagcgtaatggctacagagaa
aagcagagtctggaaaagaactctaatgtaaagtcaatttctacaagcaataacgaggca
ccaaaaaaccatactgatgcatcgggtaagatcacagtgtcagttggtgaagttgccatt
gaaattgccccaagctgccagtcaaacttgcctctgaactcaaatgcagtgcctgggtcc
tcaagctttcctatgaatgcaaatgcaatgacagagtcgtctgtttcacagagaaagaag
aataacaagggtggcaagaacaagcacaaagtggaggtagcatcatctgtagctacttca
caatcattagaagcaaaagaaccaaatcttgtgaatgcttctcttgaacttggcaagcca
attgtttttcagactgaattggattctaactcagttcagtcagtaaccatttcgaaggat
gaaaatcagttatttgagcatcagtcatctttaccatcggaagattcgcatggtagagcg
aatagccagtggaaagctcagcattctcgtaggatgtcaaaaaactcacaacttaataga
tcagcagagaaattccatggggatgctgtctgggcacccgtagggtcacaaaacaaagct
gatgcagatgaagccagtcataaaaatgtagttgaagccattactccattcatgaagatt
gatcatcaagcgcagggaaaccccaaaaataagagggcagaaattgagagatatatacca
aagcctgtagcgaaggaaatggctcagcaaggaagcattcaacaactggtggcatcttca
ggcaatcagactacatcagacgaggtcattgagggagcagattcttctccaggcaccaaa
aatagtcaacctgctggctcagctgtgggaaaagtggggcttgcctttgagtcccggaat
agggatggtagacagaataagcagggaagagcgcatgggtcatggcggcaacgaggttca
acagagttggttggtgtgcagagtttgcaagatggaccttcataccctggtcaaaatgtt
caaaaccctgtcaaggattaccaaactcagaagctggatgtaggtttggtgaaagagcaa
caaacatattctgatgaatggaatgcccctgatggtgggaacattcccgacaattctgat
tctgttgcacacgttgcagttactgccataacagatcagggagtgacaggcagagcaaaa
cgccttccactcaaggggcataaaggtatggggaataataatggtcttgatcagaaggaa
tgtagtagtggcgacgcggacaaaattgatacccaatcttcctcccttgagatgagtcac
atacacttgcctaccacttcgaaagataatcgaggtactggggaacgctcaacagctcat
tggcaacccaaatctcaaacatttcctgctaatagtcaaggaagcagaaccaatagtgtt
cgaagtggaggtcctggagttgtttggactaacaaaaaggagtctactccccagggtgct
actgtaccactaacaccactacacgacaagagaactggtgaaggtgtgtccccaccttgc
cacgatcaatttccctctaaaaaagttgatgcagaagaagcattaggtgctggagggcat
cgagaggctaaaagagggaaaaaagtaggttccctcaagggacgtccccactccccgaac
ctagttcctgtcagcccagttgaacaagctcctggaagtatggatgttagacaagagcaa
cggtcatcatctggattccggaagagtggaaaccaaaataataaccgtttcagcaggttg
catgaatctcgtggagattggaactcatctgggcatgatagcaaacataataacccatcc
tcaaactgggacagacagaggcccaattcacattacgagtaccagccagttggcccggac
aacaataacaaatcaaacattgccgagggacctaaagatggaatccctaatacaggtcca
aggttcagggagaggggtcagaatcactcgaggcatggtggggggaggttctatggacgt
caaggtggcactgatagggtagatgccgactacgagtag
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