Carya illinoinensis (pecan): 122289794
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Entry
122289794 CDS
T08745
Name
(RefSeq) beta-adaptin-like protein C
KO
K12392
AP-1 complex subunit beta-1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122289794
Membrane trafficking [BR:
cill04131
]
Endosome - Golgi transport
Others
AP-1 complex
122289794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
Atx10homo_assoc
Cnd3
Arm_2
Motif
Other DBs
NCBI-GeneID:
122289794
NCBI-ProteinID:
XP_042953015
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Position
12:26408059..26418149
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AA seq
904 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMVVA
NAVAALAEIQENSNSPVFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADARDAEN
IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPAQV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVISDDSNQLDSTLLDELLANIATLSSVYHKPPETFVTRVKATAQRTEDDDYPE
GSETGYSESSSHAADGVASPPTSSSGVPYSGARQPAPAPPAPAPPAPVPDLLGDLIGLDN
NAIVPIDQPVAPSGPPLPVLLPASSGQGLQICAQLTRQDGQIFYSLLFENGSQIPLDGFM
IQFNKNTFGLAAAGPLQVPPLQPGASARALLPMVMFQNMSQGPPSSLLQVAVKNNQQPVS
YFNDKIPFQAFFTEDGRMERGSFLETWRSLPDSNEISKDFPDIVVNSMEATLDRLAASNI
FFIAKRKHANQDVFYFSAKIPRGVPFLIELTTVIGTPGVKCAIKTPGPEMAPLFFEAIET
LIKG
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccacgactccaagtacttctccaccaccaagaagggtgaaattcccgagctc
aaagaggagctcaattctcagtacaaggataagagaaaagatgctgttaagaaggtgatt
gctgcaatgaccgttgggaaggatgtttcatctttgttcacggacgtggtgaattgcatg
caaaccgagaatttggagttgaaaaagcttgtttatctgtatcttattaattatgcgaaa
agtcaacctgacctagcaattcttgcagtaaatacatttgtgaaggattcacaggatcca
aatcctttgattcgtgctttggctgtgcggacaatgggatgcatacgagttgataaaatc
acagagtatttgtgtgatcccctccagaggtgtcttaaggatgatgatccatatgttcgc
aagactgcagccatatgtgtcgcaaagctttatgacataaatgctgagttagttgaggac
agaggctttttggaatctctcaaggatttaatatctgataataatccaatggttgttgca
aatgctgtggctgctcttgcagagatacaggagaatagcaacagtcccgtttttgagatc
accagtcatacgctctcaaagctacttactgccttaaatgaatgcactgagtggggccaa
gtttttatcttggatgctctttccagatacaaggcagctgatgctcgtgacgctgaaaat
atagttgagcgagttacaccacggctacaacatgctaattgtgcagttgtactttcagct
gtcaagatgatcctccagcaaatggaacttatcaccagtacggatgtggttcgaaatctt
tgcaaaaagatggctcctcctcttgtgacattactttctgcagaacctgagatacaatat
gttgcattgcgaaacatcaatcttatagtacaaagacgaccaacaatccttgcccatgaa
attaaggtgtttttctgcaagtacaatgacccaatctatgtgaaaatggagaaattagaa
atcatgataaagcttgcttctgacagaaatatagaccaggttctgttggaattcaaagag
tatgcaacagaagtagatgtcgattttgtcagaaaggctgttcgtgctattggtcgctgt
gccatcaagttagaaagagctgctgagcggtgcataagtgttttgctcgaactcatcaag
attaaagtaaactatgtggttcaagaggcgattatagtcattaaagatatctttagaaga
taccccaacacctacgagtctatcattgcaacactctgtgaaagcttggacactttagat
gagccagaagctaaggcatcaatgatctggataattggcgaatatgcagaaagaattgac
aatgctgacgagcttcttgaaagttttttggagagtttccctgaagagcctgcacaagtc
caactgcagttgctgactgcaacagttaaactttttcttaagaagccaactgaaggccca
cagcaaatgattcaggtcgttttgaataatgccactgtggagacagataatcctgacctg
cgggatcgcgcatacatatattggcggctcttgtcaactgatcctgaggcagctaaggat
gttgtgttagctgagaaacctgtgataagtgatgattcaaaccaactagattcaactctt
ttggatgagcttctcgccaacattgccacactatcttctgtgtatcacaagcccccagaa
acatttgttacccgtgtgaaggccacagcccagagaactgaagatgatgactatcccgag
gggagtgaaacgggatactctgagtcatcttctcatgcagctgatggtgttgcatcacct
ccaactagttcaagtggtgttccatattctggtgcaaggcaaccagctcctgcaccacct
gcacctgcacctcctgctcctgtgccagatttgcttggtgatctgataggccttgacaat
aatgctattgttcctattgatcagcctgttgctccttctggccctccattgccagtttta
ctaccagcatcatctggccagggtttacaaatctgtgcacagctgacacggcaggacggt
caaatattttacagtttattatttgagaatggctcacaaattccgcttgatgggttcatg
attcagtttaacaagaatacatttggtcttgctgctgctgggcccttgcaggttccacct
ttgcaacctggggcatcagctagggctcttctgcccatggttatgtttcagaatatgtct
caaggtcccccaagctcacttttgcaggttgctgtgaaaaacaatcaacagccagtgtcc
tacttcaatgataaaattccatttcaagcattctttactgaggatggaagaatggagcgt
ggtagcttccttgagacatggaggtcccttcctgattcaaatgagatttccaaggacttt
cctgacattgtggtgaacagcatggaagctactttagaccggctggctgcatcaaacatc
ttctttattgcaaagcgcaagcacgcaaaccaggatgtattctacttctctgctaaaatc
cctcgaggggtgccatttttgatcgaactcactactgtcatcggaacccctggggtcaag
tgtgcgatcaagactccaggcccagaaatggctcctctattctttgaagccattgagact
ctcatcaagggttga
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