Carya illinoinensis (pecan): 122296415
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Entry
122296415 CDS
T08745
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122296415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122296415
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
122296415
DNA repair and recombination proteins [BR:
cill03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122296415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
122296415
NCBI-ProteinID:
XP_042962031
LinkDB
All DBs
Position
15:42965762..42972806
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AA seq
383 aa
AA seq
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MMSGAPRVRSMNVSDSEARPVLGPAGNGNKTGLLIARKAGAKPLRQMEKPAGEATLTEDM
KACKSSRVATSSPQLHSVNVSSMLRRHEQLLHFNLSLSASCSSDASTDSFHSRASTGRLI
RSNSVGSRRKLSASKPRSVVSDGGLESLTEGLQTKKRCAWLTPNAEPCYAAFHDEEWGVP
VHDDKKLFELLVLSGALAELTWPAILIKRHIFREVFADFDPVAVSKFNEKMIIAPGSTAS
SLLSELKLRAIIENARQISKVIDEFGSFGKYIWSFVNHKPIVSRFRYPRQVPVKTPKADA
ISKDLVKRGFRSVGPTVIYSFMQVAGITNDHLISCFRFQECVAAAEGREENGIKLHKAGE
TNPDNVLESELSVAIDVLSSSSE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgggagctcctagggtgaggtctatgaacgtgtctgattcggaagcaaggcca
gtgcttggtccagcggggaacgggaacaagaccggattgttgattgcacgaaaagctggt
gcgaagccattgagacagatggagaagccagctggggaggctacattgaccgaagatatg
aaagcctgtaaatcttctcgggttgctacttcctctccccagctgcattctgtcaatgtg
tcttcaatgcttcgacggcacgagcagttgttacacttcaatttgtcattaagcgcttcg
tgttcatctgatgcttctacggattcatttcatagtcgagcttctactggcaggttgatt
cggtcgaatagtgtggggagtaggagaaagctgtctgcttccaagccaagaagtgtggtt
tctgatggtggtttggagtctttaaccgagggattgcagaccaagaagcgatgtgcgtgg
ttgacaccgaatgcagagccatgttatgctgctttccacgatgaagaatggggggttcct
gtacatgatgacaagaaattgtttgagctgcttgtcctttctggtgctttggctgaactg
acatggcctgccattttaatcaaaaggcatatctttagggaagtatttgcagattttgat
cctgttgctgtctcaaagtttaatgaaaagatgataatagcaccgggaagcacggcaagc
tctctcttatcagagctaaagctacgtgctatcattgagaatgcacgtcaaatatctaag
gtcatagatgagtttgggtcatttggcaagtatatctggagctttgtaaaccacaagcct
atagtcagcaggttccgatatcctcgccaagttccggtgaaaactccaaaagccgatgct
ataagcaaagacctagtgaaacggggattccggagtgtgggccccactgtcatatactcg
tttatgcaggttgcaggaataacaaatgaccatctcattagttgcttcagattccaggag
tgtgtagctgcagcagaagggagggaagagaatggcatcaagttacacaaggctggagaa
acaaaccctgataatgtgctggagtcagaactatctgttgctattgatgtattgagttcc
tcttcggaataa
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