Carya illinoinensis (pecan): 122299816
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Entry
122299816 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122299816
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122299816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122299816
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
122299816
DNA repair and recombination proteins [BR:
cill03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122299816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
122299816
NCBI-ProteinID:
XP_042966209
LinkDB
All DBs
Position
16:complement(22133641..22136260)
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AA seq
415 aa
AA seq
DB search
MCSSKAKVTVGIDAIPTPTVARINGRPVLQPTCNLVPRLERRNSLKKVTPAPSPLAPQPP
PPLPTSATSPRTKALLTPPISPKLKSPRPPAVKRGNDPNGLSLSAEKIVIPKVSTKTPTL
ERKKSKSFKGIIYGDGAAVSCVGVSPLVEASLSYSSSLITESPGSIAAGRREQMALLQAQ
RKMRIAHYGRSKSEKFEKVVPSDYSSDITSKRTEEEKRCSFITPNSDPIYVAYHDEEWGV
PVHDDKMLLELLVLSGAQVGSDWSSILKKRQDFRNAFSGFDAEIIAKFGDKQMMSICSEY
GIDISRLRGVVDNSNRILEIKKEFGSFDKYIWGFVNHKPISTQYKAGHKIPVKTSKSESI
SKDMVRRNFRFVGPTVVHSFMQAAGLTNNHLITCHRHLQCSLMAATRRTTTEPAL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagctccaaggccaaagtgactgttggcattgatgccattccaacccccactgtt
gctagaatcaatggcaggccggtccttcaacccacctgcaatcttgttcctagattggaa
aggcgtaattcattgaagaaagtgaccccagcaccttcccctctggcaccacaaccacca
ccacctctgccaacttctgctactagtcctagaaccaaggctttgctgacacctccaatc
tctccaaagttgaaatccccgagaccacctgcagtaaagcgagggaatgaccccaatgga
ttgagtttgagtgcagagaagattgtcatcccaaaagtttccaccaaaactcctacttta
gagaggaagaagtcgaaaagtttcaagggtattatttatggtgatggagctgctgtgagt
tgtgttggggtttctcctcttgtggaggcatccttgagttactcttcgtctttgatcact
gagtctccaggaagcattgctgcggggagaagggaacagatggctctgcttcaggcacag
agaaagatgagaattgcccattatggaagatcgaagtctgaaaagtttgagaaagtggtt
ccctctgattattcgagtgatatcacatcaaaaaggactgaagaagagaagagatgcagt
tttatcacacccaattcagatcccatctatgtcgcttaccatgatgaagaatggggagtt
cctgtccatgatgacaagatgttgcttgaattgttggtcttaagtggtgctcaggttggt
tcagattggagctcaatcttgaaaaaacgccaagatttcaggaatgcattttcaggattt
gatgcagaaattattgccaagttcggtgataaacaaatgatgtcaatttgttcagaatat
ggcattgacataagccgacttaggggcgtcgtcgacaactctaaccgaattcttgagatt
aagaaagagtttgggtcatttgacaaatatatttgggggtttgtcaatcacaagccaatc
tccactcaatacaaagcaggccacaaaatccctgtgaagacatcaaaatcagagagcatt
agcaaagacatggtcaggaggaacttcaggttcgtcggtccgaccgtggttcattcgttt
atgcaagccgccggcctcaccaacaaccacctgatcacttgccacaggcacctccagtgt
tccttgatggcagccacccgccgcaccaccacagaaccagctctatag
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