Carya illinoinensis (pecan): 122302205
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Entry
122302205 CDS
T08745
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic
Organism
cill
Carya illinoinensis (pecan)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
TRCF
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
122302205
NCBI-ProteinID:
XP_042969275
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Position
3:53880..84377
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AA seq
820 aa
AA seq
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MASLIRVSDISTPLVLKDSSSPRLWTLFGLRCLTCHFKTKPSLSLAKAVYTQGLFASGPV
KFSKPRDKIDQDDDPIFVLNDRIRRDYNERDASRTVMDSDEAEKYIQLVKEQQQRGLQKL
KGGGVGGGGFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVPKGSTEPIEYVFIEYADD
MAKLPVKQASRLLYRYNLPNESKRPRTLSKLSDTSVWERRKTKGKVAIQKMVVDLMELYL
HRLKQRRPPYPKSLAMAEFAAQFPYEPTPDQKQAFVDVEKDLTERETPMDRLICGDVGFG
KTEVALRAIFCVVSDRKQAMVLAPTIVLAKQHFDVISERFSMYRDINVGLLSRFQSKAEK
EQYLDMIKNGRLDIIVGTHSLLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL
TLSATPIPRTLYLALTGFRDASLIATPPPERVPIKTHLSAYSKEKVISAIKYELDRGGQV
FHVLPRIKGLEEVMEFLEQSFPNVEIAIAHGQQYSKQLEETMERFAQGEIKILICTNIVE
SGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRTDKEAHAYLFYPDKSLLSDQALERLVA
LEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEHRVI
SVPYQSVQMDININPHLPSEYINNLENPMEIINEAEKAAERDIWSLMQFTENLRRQYGKE
PYSMEILLKKLYVRRMAADLGITKIFSSGKMVGMKTNMTKKVFKLIMDSMVSDVHRNSLD
LVGDQIKAELLLELPREQLLNWIFQCLAELHASLPALIKY
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctcatccgagtatccgacatttccacgcctcttgtcttgaaggacagttca
tctccgaggctttggacacttttcggtcttcggtgcctcacttgccacttcaaaacaaaa
ccttcactttcactcgccaaagctgtttacactcaaggcctcttcgcctccggacccgtc
aaattctctaaaccaagagacaaaatcgaccaagacgacgatcccattttcgtactgaac
gacaggattcgccgtgattataacgagcgagatgcttccagaacggtcatggactcggat
gaggccgaaaagtatattcagctggtaaaggagcagcagcagaggggcttgcagaagctc
aagggtggtggtgttggtgggggtgggtttagttacaaggtggacccctatactctccgt
tctggcgattacgttgtacacaaaaaggtgggtattgggcgatttgtggggatcaaattc
gatgtgcccaagggttctacggagccaatcgagtatgtctttatagaatatgcagatgac
atggctaaacttccggtcaagcaggcttctcgtttgctctatcgctacaatctcccaaat
gaatcaaaaaggccccggacattgagtaaattgagtgatactagtgtatgggagaggaga
aagacaaaaggaaaggttgcaattcagaaaatggttgttgacttgatggagctgtattta
cataggctgaaacaaaggcggcctccctacccaaaaagtcttgccatggccgaatttgca
gctcaatttccttatgaacccacaccagatcaaaaacaggctttcgttgatgtggagaag
gatttgactgagagagaaactccaatggacagattgatttgtggagatgttgggtttggt
aaaactgaagttgcattacgtgccatcttttgtgtagtctcagacagaaagcaagctatg
gttctagcaccgacaattgtgttagccaagcaacattttgatgttatttcagagcgattt
tctatgtatcgtgatatcaatgttggactcctgagcaggtttcagagcaaagcagagaaa
gagcagtacctggatatgataaaaaatggtcgattggacattattgtcgggactcactca
cttctcggaagtcgtgttgtgtataataacctaggtcttcttgtggttgatgaggaacag
agatttggtgtcaagcagaaggagaagattgcttcattcaaaacttcagttgatgttctt
actctctcagcgacccctataccaagaaccctttatttagcattgactggttttcgtgat
gcaagtttgattgcaactccacctccagaaagggtccctataaaaactcacctttcagca
tatagcaaggaaaaggtaatatcagccatcaagtatgagctggatcgtggtggccaagtt
tttcacgtcctgcctcgtatcaaaggacttgaggaagttatggaatttcttgaacagtca
tttccaaatgttgaaatagctattgcacatgggcagcaatattcaaagcagcttgaggaa
accatggagagatttgctcaaggtgaaataaagatccttatatgcacaaatattgtggaa
agtgggctcgatattcaaaatgcaaacaccatcataattcaggatgttcaacaatttggc
ctagcacaattgtaccagttacgtggaagggtagggcgaacggataaggaagcgcatgca
tacttgttttacccagataagtcactactgtctgatcaagcattggagagacttgtagct
ctagaagaatgccgtgaacttggccaaggatttcaactggcagagagagacatgggtatt
agaggttttggtacaatctttggggagcagcagacaggtgatgttggaaatgtaggaatt
gatctcttctttgagatgctctttgagagcttgtccaaggttgaagagcatcgtgtaatt
tcagttccttaccagtctgtacagatggatataaatataaaccctcacctcccttcagag
tacataaataatctggagaatcctatggaaataattaatgaagctgagaaagctgctgag
agagacatctggagtttgatgcaatttacagagaatctgcgccgccaatatggaaaagag
ccatactccatggagattctattgaagaagctttatgtgaggagaatggctgcggatcta
ggaataactaaaatattttcttcaggaaagatggttggcatgaaaacaaacatgactaag
aaggttttcaagcttataatggattcaatggtttctgatgttcatcgaaattctttggat
cttgtgggagatcaaattaaggcagaacttcttttagagctaccaagagaacagctcctg
aattggatcttccaatgcttggctgaacttcatgcttcgctaccagccctaataaaatac
tag
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