KEGG   Carya illinoinensis (pecan): 122302573
Entry
122302573         CDS       T08745                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122302573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cill03400]
    122302573
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     122302573
SSDB
Motif
Pfam: HD HD_assoc_2 GyrB_insert LMSTEN
Other DBs
NCBI-GeneID: 122302573
NCBI-ProteinID: XP_042969818
LinkDB
Position
3:complement(3605121..3616025)
AA seq 471 aa
MGAYCNDNLHPSSMHGFLSSEDLRLYKHVHDNVHGNIYLDPLCLKFIDTQEFQRLRDLKQ
LGLAHLVYPGAVHSRFEHSLGVYSLASEAVHKLKNYQGLELGIDHFDIQTVKLAGLLHDV
GHGPFSHLFEREFLPRVLADHWSHEEMSVKLVDCIVDEHHIDVDPEMIKRVKEMILASSN
YSLPKGSREKRFLYDIVANGQNGIDVDKFDYIIRDCRACGLGCNFQFQRLMETMRVMGDE
ICYRAKEYLTIHKLFATRADLHRTVYTHSKVKAIELMVADALLKANDYLEISSYTQDPSE
YWKLDDTIIKTIETAPNQELKESRDLILRIRSRNLYQFCNEYAVPKDRLENFKDVTPQDI
VCSQKNGGVILKVEDVAISNVRIDLTRGRHNPLERINFFKDYESDDKFPIPDDRVSHLLP
TSYQDMIVRVYSKKPELVGAISEAFENFQLQTYGIKAQVHSTPEKKKQRRL
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgggagcttattgcaacgacaacctccatccgtcctcgatgcacggcttcctttcctcc
gaagatctcaggctctacaagcacgtccacgataacgtccacggcaacatttacctcgac
cccctctgtttgaagtttattgatacccaggagtttcaaaggcttcgtgacctaaagcag
cttggtcttgcacacttggtttatccaggtgctgtgcattccaggtttgaacattctctt
ggggtgtattcgcttgcaagtgaagccgttcacaagcttaaaaattatcagggtttggag
cttggaattgatcactttgatattcaaacagtgaaacttgcagggcttctgcatgatgtg
ggccatgggcctttcagtcacttgtttgaacgggaatttcttcctagggttcttgctgac
cattggtctcatgaggaaatgtcagtgaagttggttgactgtattgttgatgagcaccat
attgacgttgaccctgaaatgattaaaagagtcaaggagatgatactggcaagctctaac
tattcactgccaaaaggttcaagggagaagcggttcttgtatgatatcgttgcaaatggc
caaaatggaattgatgtggacaagtttgattatatcattcgtgactgccgagcatgtggt
cttggatgcaactttcagtttcagaggttaatggagacaatgcgagtaatgggtgatgag
atttgctatcgagctaaagaataccttaccatccacaagttatttgccactcgagcagat
ctgcaccgaacagtttatacacattccaaagtcaaggcaatagagcttatggtggcagat
gcactgctaaaggcaaatgattatcttgagatttcatcgtacactcaagatccttctgag
tactggaagctagatgacacaataattaagactatcgagaccgctccaaaccaagaacta
aaggaatctagggacttgatcctgcgtattcgcagcaggaatttgtaccagttttgcaat
gagtatgctgtaccaaaggacagactagaaaatttcaaagatgtcactcctcaagatatc
gtctgttcccagaaaaatggtggagtgatactaaaggtggaggatgttgctattagcaat
gtcaggattgatttgactcgcggaaggcataatcctctagagagaatcaactttttcaag
gattatgagagtgatgataagttccccatacctgatgatcgtgttagtcacttgctacct
acatcatatcaagatatgatagtgagggtgtattctaaaaagcctgaactggtgggggca
atttctgaggcttttgaaaatttccagttacagacgtatgggattaaagcacaagttcat
tcaacaccagagaagaagaaacaacgccgtctataa

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