Carya illinoinensis (pecan): 122306882
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Entry
122306882 CDS
T08745
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122306882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122306882
04147 Exosome [BR:
cill04147
]
122306882
04090 CD molecules [BR:
cill04090
]
122306882
Enzymes [BR:
cill01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122306882
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122306882
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122306882
CD molecules [BR:
cill04090
]
Proteins
122306882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
AAA_29
ABC_ATPase
AAA_21
RsgA_GTPase
AAA_30
AAA_24
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
122306882
NCBI-ProteinID:
XP_042975365
LinkDB
All DBs
Position
4:37063957..37071874
Genome browser
AA seq
1245 aa
AA seq
DB search
MSSPEKNELGKEVTRRKEKVSVAVLFRYADWVDILLMFLGTMGAIGDGMSTNCLLVFASR
IMNSLGYGKTQQNRGKFMDEVEMCSLSFVYLGLAVMVVAFMEGYCWSKTSERQVRKIRYK
YLEAVLRQEVGFFDSQEATTSEIINSISKDTSLIQEVLSEKVPIFLMHSSVFLSGLGFAT
YFSWRLSLVAFPALLLLIIPGLIYGKYLLYLSKKSYKEYSKANAIIEQALSSIKTVYSFT
AERIIVEKYSSTLDKTTRLGMKQGIAKGLAVGSTGLSFTIWAFLAWYGSRLVMYKGESGG
RIYAAGISFILSGLSLGMALPDLKYFTEASVAATRIFDRINRVPLIDGEDTKGVVLDKIR
GELEFEHVKFTYPSRPDSVVLKDFNLKVEAGKTVALVGASGSGKSTAIALVQRFYDADEG
EVRLDGVDIKSLQLKWIRGKMGLVSQEHALFGTSIKENIMFGKLDATMEEVTAAAMLANA
HNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPAILLLDEATSALDSESESLV
QNALDQASMGRTTLVVAHKLSTVRNADLIAVVGGGCIIEIGSHNDLINRQNGHYAKLAKL
QRQFSCDDQEQSSEVRVSSVARSSASRLSTARSSPLVFPKSPLSVDDPPPISHPPPSFFR
LLSLNASEWKHGLIGSLSAIAFGAVQPVYALTIGGMIAAFFAQSHEEMRARIRTYSLILS
SLTLVSLTMNLLQHYNFAYMGEKLTKRIRLRMLEQILSFETAWFDEDQNTSGALCSRLSN
EASMVKSLVADRVSLIVQTTSAVSIAMIMGLVVAWKLALVMIAVQPLTILCFYTRKVLLS
SISTNFVKAQNQSTQIAVEAVYNHRIVTSFGSMGKVLQLFEEAQEEPRKEAQKKSWLAGI
GIGSAQCLTFMSWALDFWYGGTLVEQGVISAGDVFKTFFILVSTGKVIAEAGSMTSDLAK
GAAAVASVFKILDRQSLIQGSYFNDGGDSRGTKLEKISGRIEMKKVDFAYPSRPECLVLR
QFCLEVKPGMSVGLVGRSGCGKSTVIGLIQRFYDVERGSVKVDGVDIRELDIHWYRRHTA
LVSQEPVIYSGTIRDNIVFGKLDAPENEVVEAARAANAHEFISSLKDGYETECGERGVQL
SGGQKQRIAIARAIIRNPIVLLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNT
IKKLDSITVVADGKVLEQGTYAQLKSKRGAFFSLASLQNLDPTCT
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccagagaagaatgagttagggaaagaagtaacgagaaggaaggaaaaagtt
tccgtagccgtgcttttcaggtatgctgattgggttgacattttgttgatgtttttgggt
acgatgggtgctattggggatggcatgtctacaaactgcttgcttgtcttcgctagccgt
atcatgaacagcttgggttatggaaagacacaacaaaatcgtgggaagttcatggatgag
gttgaaatgtgcagtttatccttcgtatacttgggattagcagtaatggtggtggctttt
atggaaggttattgttggagtaaaacaagtgagcgacaggtgcggaaaattcgttacaag
tacttggaagctgttctcagacaagaagttgggttttttgattcacaagaagcaactact
tcagagatcattaatagcatatcaaaagatacttctctcatacaagaagttcttagtgaa
aaggtgcccatatttttgatgcactcgtcagtgttcttgtcaggccttggattcgccact
tacttctcttggaggctgtctttagtagctttcccagctttactcttgcttattatacct
ggattgatttatggaaaatatcttctctatttgtccaagaagtcttacaaggaatacagt
aaagcaaacgccattattgagcaggctctaagctcaattaaaacagtttattcattcact
gctgaaaggataattgtggaaaaatattcgtcaacattggataaaaccacaaggctggga
atgaagcaaggcattgcgaaaggacttgcggttggaagtacaggtctttctttcacaata
tgggctttcctagcttggtatggaagtcgtttggttatgtacaaaggtgaaagtggagga
aggatctatgcggctggaatttccttcatattaagtggactatctcttggcatggcactt
ccagatttgaagtactttacagaagcctcagtagctgctacacgaatatttgataggatt
aatcgggtacctttaattgacggtgaagatacaaaaggagttgtattggataaaattaga
ggagagctagaattcgagcatgtcaaattcacatacccttctcgtccagattcggttgtt
ctcaaagatttcaatcttaaagttgaagctgggaaaactgttgctcttgttggtgccagc
ggaagtggcaaatccacagcaattgcattagtgcaaaggttttatgatgcagatgaggga
gaagtgcgacttgatggggtggatataaagtcactacagttgaaatggataagagggaaa
atggggcttgttagtcaagaacatgcactcttcgggacatcaataaaggaaaacataatg
tttgggaagcttgatgctaccatggaagaagtcacggctgcagcaatgcttgcaaatgct
cataacttcattaggcagcttcctgaaggatatgagaccaaggtcggtgaaagaggagct
ttattatcaggtggacagaagcagcgcattgctattgccagagccatcatcaagaaccct
gccattctcctgcttgatgaagcaacaagtgctcttgactccgaatcagaatcattggtc
caaaatgcacttgatcaagcttctatgggaagaaccaccctggtggttgcccacaaactc
tctacggttcgaaatgcagacctcattgctgtcgttggtgggggttgcataattgaaata
ggttcacataacgacctcatcaatcgacaaaatggtcactatgcgaaactggcaaaacta
cagagacagttcagttgcgatgaccaagaacaaagctccgaagttcgtgtttcttcagtt
gcaagaagcagtgctagtcggcttagcactgctagatcaagcccgttagtgttcccaaaa
tcaccactgagtgtcgatgaccctcctcccatatctcaccccccaccttcctttttccgg
cttctctctttgaatgcttcagaatggaagcatggtcttattggaagtctttcagctata
gctttcggggccgtccaacctgtctatgcccttaccataggaggcatgatagcggcattc
tttgcacaaagccacgaagaaatgcgtgctagaatccgtacatattccctaattctctct
tcactaaccttggtttctctcacaatgaacctcttgcagcactataatttcgcttacatg
ggagagaagctgacaaagagaatccgattaagaatgctcgagcagatattgagttttgaa
acagcttggtttgatgaagatcagaatactagcggggccttatgttcgagattaagcaac
gaggcttccatggttaaatctcttgtcgcagacagagtttctctaatagtccaaaccact
tccgccgtatccattgcaatgatcatggggctagttgtggcttggaagctagcactcgtc
atgattgcagttcaacctctcacaattctatgcttttatacgcgtaaagttttactctcc
agcatctcaactaactttgtcaaggcacaaaaccaaagtactcaaattgcagtggaagca
gtctacaatcatagaattgtgacttcgtttggaagcatggggaaggttcttcaattgttt
gaagaagctcaagaggagcccaggaaggaagcccaaaagaagtcatggctagctgggatt
ggcatagggtcggctcagtgcttgacattcatgtcatgggctctggatttttggtatgga
ggtacacttgtggaacagggggtcatatctgccggggacgtgttcaagacatttttcata
ttggtgagcaccggaaaagtcatagcagaagctgggagcatgacttctgacttagcaaag
ggtgctgctgcggttgcatccgtgttcaagattcttgaccgccagtctctcattcaaggg
tcctattttaatgacgggggtgacagtcgtggaactaaattagagaaaataagtggaagg
atagagatgaagaaggttgattttgcatacccaagccgtcctgagtgcttagtgttgcgt
caattctgtctagaggtgaaaccgggcatgagtgttggacttgttgggagaagtgggtgt
ggcaaatcaacagtaatcggattgatccagaggttctatgatgttgagagggggtcagtg
aaagtggatggggtggacataagggaactagatattcactggtaccggaggcacactgca
ctagttagccaagagccagtcatatattctggcaccattcgtgacaacattgtatttggg
aagctcgatgcaccggagaatgaagtggtggaggctgccagagctgccaatgctcatgag
tttatctcatcactgaaagatgggtatgagactgaatgtggagaaagaggagtgcaattg
tcaggagggcaaaagcaaagaatagcaatagcaagagctataattcggaacccaattgtt
ctgctactagatgaggcaacaagtgctctagacgtgcaatctgagcaagttgttcaagaa
gcattggatagaatcatggtagggaggacaacaattgtggtggcacataggcttaacacc
atcaaaaagctcgattcgatcacggttgtagcggatgggaaagtgttggagcaaggaacc
tacgctcaactaaagagcaagcgtggtgccttctttagtctcgccagccttcaaaatttg
gatccaacctgcacttga
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integrated database retrieval system
