KEGG   Carya illinoinensis (pecan): 122311258
Entry
122311258         CDS       T08745                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122311258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cill03400]
    122311258
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     122311258
SSDB
Motif
Pfam: HD HD_assoc_2
Other DBs
NCBI-GeneID: 122311258
NCBI-ProteinID: XP_042981668
LinkDB
Position
5:complement(20443305..20449975)
AA seq 464 aa
MGVRTDAELSMDRRVLKHVHDNVHGNIYIEPLFLKFIDTEQFQRQVHFTINPQNALAHMV
YPGAVHSRFEHSLGVYWLAGKAVDTIKTYQGFELDIEHSDIQTVKLAGLLHDVGHGPFSH
SFEREFLPLVLNGFKWCHEDMSVKMIDYIVDEHNIDIGTERLKKVKEMITASHEHTPTKS
MVEKHFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCNFQFERLMETMRVIGDEICYRAK
DYLTIHKLFATRADLHRTVYTHAKVKAIELMVTDALLKANDSLGISSSIHQPAEFWKLDD
SILRRIEISTEPELKESRDLILRIRRRELYQFCNEFSVPKDKMEHFNKITPQDIVCSQKA
GGVTLKEEDIAVSNVKIDLTRERNNPLECIKFFKDYESDETFPIQDDRISHLLPAFYQDM
IVRVYSKKPELVDAVSEAFENFQLKTYGKKAQVHATPEKKKRRT
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgggagttcgtacggacgcagagctctcgatggaccgtcgtgtgttgaagcacgtccac
gacaacgttcacggcaacatctatatcgagccgctctttttaaagtttattgataccgaa
cagtttcagaggcaagtccattttaccatcaacccacaaaatgctttagcacacatggtt
tatccaggggcagtgcattctcgctttgaacattcacttggggtgtactggttggccggc
aaagctgttgatacaatcaagacttaccaaggcttcgagctcgatattgagcattcagat
atacagacagtaaaacttgcaggactactacatgatgttggccatgggccgttcagccac
tcgtttgagcgcgagtttcttcctctggttcttaatggcttcaaatggtgtcatgaggac
atgtctgtgaagatgatagactacattgttgatgagcacaatatcgacattggtactgaa
cgccttaagaaagtgaaggaaatgataacagctagccatgaacatactccaacaaagagt
atggttgaaaagcatttcttgtatgatattgttgcaaatggtcggaatggaatagatgta
gataagtttgactacatagttcgggactctcgggcttgtggtctaggttgcaattttcaa
tttgagaggttgatggaaactatgcgagtcattggtgacgagatatgttatcgagccaag
gattatctgacaatccacaagctgttcgccactcgtgctgatttgcatagaacagtttat
acacatgcaaaagtaaaggcaatagaactcatggttaccgatgctctgctaaaagctaac
gattctctaggcatttcatcctcaattcatcaaccagctgaattttggaagttggatgac
tcaatattaagacgaattgaaatttctactgaacctgagctcaaggaatcaagagacttg
atcctacgcattcggagaagggagctatatcagttctgcaatgagttctctgtccccaag
gacaaaatggagcacttcaataaaatcactccacaagatattgtctgttcccagaaagct
ggtggtgttacactaaaagaagaagatattgccgtgagcaatgtaaagattgatttgaca
cgtgaaaggaataatcctcttgaatgcatcaagtttttcaaggattatgagagcgatgaa
acattcccaatccaagatgaccgcatcagccacctgctacccgcattttaccaagacatg
atagttagggtgtactcgaagaagccggaactggtggatgcagtatctgaggccttcgaa
aattttcagttgaagacatatggaaagaaagcacaggttcacgcaactccggaaaagaag
aaacgccgaacataa

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