Carya illinoinensis (pecan): 122311353
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Entry
122311353 CDS
T08745
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122311353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122311353
Spliceosome [BR:
cill03041
]
Complex A
U1 snRNP components
U1 related factors
122311353
Complex B
122311353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
DUF5471
Motif
Other DBs
NCBI-GeneID:
122311353
NCBI-ProteinID:
XP_042981832
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All DBs
Position
5:complement(20355291..20363911)
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AA seq
972 aa
AA seq
DB search
MADHPPTLNSNPSLSEPDTLDPQSNQPDPIPPPPPPPPPSLPPQSSMSTPLSTPIPVNPT
SNASPLPSAPPPPPPLPQGPQVSYAPPQVSGGAAVPPAPPSFRPVPQFSPMPNPGLTNLN
YQNPGGVQPPGVSVAPGAVSGGIGASPVSVPQPMLPYQLPPGQPPRPYPSPMPNGYPAVP
HHGTIPPPGLPRYPSPYTPMVRPPYPPRLPGAIGMLPAMSRPPIPGVPGVRPIIPPIVRP
IIPTVTPVEKQQTTVYVGKIASSVENDFILSLLQLCGPVKSWKRAQDPTDGTPKGFGFCE
FESAEGVLRALRLLSKFNIDGQELVLNVNQATKEYLERYVDKKTENSKKLKDAEAAETEK
EDDSAANVESNEHLKSSVEDSNKEENVLGSKENNDFANFGIVTNEDKEVDREALEKLTSM
VEERLKTRPLPPPPPQATGDGSGNSNSDVPAKSRDGDSEMRNNAAEDKNDDETTSETKPA
SEHDRPETSSPDRSRRYDRRSRDRDRERDMKREKEREIERYERETERERVRKEREQRRKI
EDAERQYEECLKEWEYREREKEKLRQYEKEREKERERKRKKEIKYDEDDEDDDSRRRWRR
SMLEDKRKKRLREKEDDLADRHKEEEEIVEAKRRDEEEQKQKQQIDALRVSSNNLLNGSA
KTVLSEASSAEIKDNLVEHGYEGDSACESHIGERIVQNGIGEESTISSIAASETRHTGNA
PAKKLGFGLVGSGKRTAVPSVFHEEEDDDAHKDKKMRPLVPIDYSTEELQAVQPTVSGAP
SPNLAAAAEFAKRISNFNPKEDKPDAERERSRRSNDKSSQRDRDRGDDNVNRTKDENREK
NLDRDRDRDQGPDKSKTPDNKKLLSLKQLIDMIPKTKEELFSYEINWAVYDKHELHERMR
PWISKKITEFLGEEETTLVDYIVSSTQEHMKASQMLELLQSILDDEAEMFVLKMWRMLIY
EIKRVEMGVASK
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccatcctccaaccctaaactccaatccatctctttccgaacccgacaccctc
gatccccaatcaaaccaacccgatcccataccaccaccgccaccaccaccaccaccatca
ctaccaccgcagtcgtcgatgtcgactccattgtctacccctatccctgttaaccctact
tcaaacgcttcacctcttccatctgcgccgccgccgccgccgccgcttccacaagggcct
caggtgtcctacgcgccgccacaggtctccgggggagccgcggtacctccagcgccgcct
tcgttccgcccagtccctcagttctcgccgatgccgaatcctggcttgacgaatctcaat
taccaaaaccctggcggggttcagccacctggtgtgagcgtggctcctggtgctgttagt
ggcggcattggggcctcccccgtgtctgtgccgcagccgatgctgccttatcagttgccg
ccgggccagcctccgagaccgtacccgtcgcctatgccaaatgggtacccagcggttcct
catcatgggactatacctcctcccggacttcctcgttatccatctccatatacacctatg
gttcggcctccatatcctccacgcttaccaggagcgattggcatgcttccagcaatgtca
cgtcccccaattccaggggttcctggagttcgccccattataccccctattgttaggcca
attattccaactgttactccagttgaaaaacaacaaaccacagtatatgttggtaagatt
gcatcatcagtggaaaacgatttcattctgtccctccttcagctttgtggacctgtgaaa
agttggaaacgtgctcaagatcccacagatgggactcctaaaggctttgggttctgtgaa
tttgagtctgctgaaggggttcttcgtgcattgcgtttacttagtaaatttaatattgat
gggcaagaattggtgttaaatgttaatcaagcaacaaaagaatatctggaacggtatgtt
gataaaaaaactgaaaactcgaagaaacttaaagatgcggaagctgcagagactgagaaa
gaggatgattctgcagcaaatgttgagagtaatgaacatctaaagtcctctgtggaggac
tcgaataaagaggaaaatgttttggggagcaaggaaaataatgatttcgctaattttgga
attgttaccaatgaggacaaggaagttgaccgagaggctttggagaagctcaccagcatg
gtagaagagagacttaagaccaggcccctgcctccgcccccaccacaagcaactggtgat
ggctctgggaattcaaactctgatgtgcctgctaaatcgagggacggggactctgaaatg
agaaacaatgcagctgaagataaaaatgatgatgagacaactagtgaaaccaaacctgca
agtgagcatgacaggcctgaaacaagttcacctgataggagtaggaggtatgataggaga
agcagagacagagaccgggagcgggatatgaaaagggagaaggagcgggagattgaaaga
tatgaaagagaaacagaacgagagcgggttaggaaagaaagggagcaaagaagaaagatt
gaggatgctgagcgtcagtatgaagagtgtctcaaagaatgggagtatagagaaagagag
aaagagaaactgcggcagtatgagaaggagagggaaaaagagagggaacgcaaacggaag
aaggagataaaatatgatgaagatgatgaagatgatgattcgagaagaaggtggcgtcgg
agtatgttagaagacaagagaaagaagaggctgcgagaaaaggaagacgacttggctgac
aggcataaagaagaagaagaaattgttgaggcaaagaggagagatgaggaggaacagaaa
cagaagcaacaaatagatgcattgagggtctcatccaataatttattgaatggaagtgca
aaaactgttttgtctgaagcatccagtgccgaaataaaagataatcttgttgaacatggc
tatgaaggtgattctgcctgtgagagccatataggtgaaaggattgtacaaaatggtatt
ggtgaagaatcaaccatatcgtcaattgctgcatcagaaacacggcacactggcaatgcc
ccagcgaaaaagttaggcttcggtttagttggatctgggaaacgaactgctgtcccttct
gttttccatgaggaggaggatgatgatgcacataaggacaaaaagatgaggccccttgtc
ccgattgattactcgactgaagaactgcaggctgtccaacctactgtatctggggcacca
tcaccaaatttggctgcagcagcagaatttgcaaagcgcatatccaatttcaatcccaaa
gaagataagccggatgcagaaagggaaagaagtagacgttctaatgacaagtcaagccag
cgggatagggaccggggtgatgacaatgtgaatcgcaccaaagatgagaacagagagaag
aaccttgaccgggatagggatcgggaccaggggccggataaatcaaagacaccagataac
aagaagcttttgagtttaaagcaattgatagacatgataccaaagaccaaggaggagttg
ttctcatatgagatcaattgggctgtgtatgacaagcatgagctgcatgaaagaatgaga
ccttggatttcaaagaagataacagagtttttaggagaggaagaaacaaccctggtagat
tacattgtatccagtactcaagaacatatgaaggcatctcaaatgctggagctattacaa
tccattttagacgatgaagctgaaatgtttgttctcaaaatgtggaggatgctcatctat
gaaattaagcgggtggagatgggcgtcgcttcaaagtga
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