Carya illinoinensis (pecan): 122312864
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Entry
122312864 CDS
T08745
Name
(RefSeq) protein SHORT ROOT IN SALT MEDIUM 1 isoform X1
KO
K25827
cell division cycle and apoptosis regulator protein 1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122312864
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
122312864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBC1
LAIKA
BURAN
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
122312864
NCBI-ProteinID:
XP_042983456
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All DBs
Position
6:27851168..27868493
Genome browser
AA seq
1371 aa
AA seq
DB search
MYSSRGSNAYGQQSYAGQSAYGANLGPAYSASSLGGPDGGSQAARHSSMLGGSLEADVGG
YRTHPPAAAHYGGQYSSVYGLAALSSAQQVPALNAKGAGPSALEGRGSYASAIPGSPKYV
SSDYVQSSGHGYGHKGDQLYADKIPDYPGPDRHQYGERHSAYIGKDLQSEQTRRYADSIG
FSNQNQNDMYDRIDKALLRQEQLLKSQSLQSASLDGSARQADYLAARVTTSRHPTQDAIS
YGGRMDADPRTLSMLSASSYSGQRAPSIVGEASLRNMDDLVYAQSSSNPGYGVSLPPGRD
YATGKGLHGASAEVDYPSSTLSRSRHIRIEDHKDDKACYLREFELREEERRRERLRVRER
DRQRERELDRERERGQERVRERQRIMERWEEEGERGRKRGLETRRDRIPPRKSRDRHDSS
VAKEAKSLRQDSRHHDTLHRHHSPVKEKRREYICKVYSSSLVDVERDFLSIDKRYPRLFV
SAEFSKAVVNWPKENLKLPIHTPVSFEHDVLEEERAKGLKVPSAELLVEEPAKSGSTVWN
AKMILMSGLSKNAMEELSSEKSSDDRIPHICNIVRFGVLRRDQSWMAIGGPWDSVDGGDP
SVDDTSLIRTVLRYAKNITQLDLQHCCNWNRFLEIHYDRVGKDGLFSHKEVTVLFVPDLS
ECLPSLEAWRDQWLAHKKDVAGREQQVALKKEWSREKKDGLKDKQKDSTKDVKRVDKSGK
EKESAPLGQSEDVNKKEKDVNDVKAITAEEKADGNDKRLEKKGGAEQGEENKTLEKNERG
KSVGAQKSGSVKSGKKKIIKKIVRQKVVDKTAGNSASNQNDKLDEKENGKNTNSEIPDLQ
DADSGAKHFVRKKVMRKIPVGKTARNKDMQDKQNDNLDPSSAAVVEGTIVKKTVKRKIIK
RVAKRKVSVLQSGDAVADNKKDAGGDEIKVVRTVDEPESMEGQAANTENQVSEIKRSGKK
TVEQNDDVVDSSKTEIKANKDAKSEGEKSGQGAKLETQADEPKASQNANHSGKGGKSKDG
EKSKDGQEKKDNNGKYLSRSRSNKELIDKRKPEEPPRHPGLILQTKWSTDSKLRSVSLSL
DSLLDYTDKDIDEASFELSLFAESLYEMLQYQMGCRLLTFLEKLRVKFVRKRNQRKRQQN
EVHEMERDKNSPAKRLKTNEHSVKDLSIKPEISSPADIDDDKTKAEEDKSVDPLYELKME
DETDGDEDPEEDPEEYEETEESMQRDSYDANKKEEGKTNVNAEPEKVLGIEKDEAEKSLK
VKPKAVETNPKSDEEMCIKREATVDSGERGETSAFKEVSVDKELLQQAFRFFDRNRVGYI
RVEDMRLIIHNLGKFLSHRDVKELVQSALLESNTARDDRILYNKLVRMSGI
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgtactcctctagaggtagcaatgcgtacgggcagcaatcgtacgccggccaatccgca
tacggcgcaaatttgggacctgcctattccgccagttctctaggaggccctgatgggggc
tctcaggctgctcggcattcatcaatgttaggcggttctctggaagctgatgttggtggg
tatagaactcatcctccagctgcagctcactatgggggacagtatagctctgtgtatgga
ttggctgctttgagtagtgctcaacaggttcctgcattgaatgcaaaaggtgctggacca
tcagctttggagggtcgtggtagctatgcatcggccatacctggttcacctaaatatgtg
tcaagtgactatgtccaatcctcaggccatgggtatggtcacaagggtgatcagttgtat
gcagacaagattccagattatcctggaccagatagacatcaatatggtgaacgacatagt
gcttatataggaaaggacttgcaaagtgaacaaactagacgatatgctgattctattggc
tttagtaatcaaaatcagaatgacatgtacgatcgcattgataaggcattgcttcgacaa
gagcaattgttaaaatctcaatcactgcaatctgcttctctggatgggagtgccagacaa
gcagactatcttgcagcaagggttactactagccgtcatcccacccaagatgctatctct
tatggaggaagaatggatgctgatcctcgcactttatcgatgcttagtgcttcttcttat
agtggacaacgagctccatcaatagtaggcgaagcttcgcttagaaatatggatgatcta
gtgtatgcacaaagttcttcgaatcctgggtatggagtgagtctacctcccggtagggac
tatgccactggaaaggggctccatggtgcatccgccgaagtggattatccaagcagcaca
ttgtcacggagtcgccatataaggattgaagatcacaaggatgacaaggcttgttatctt
cgagagtttgagctaagggaggaggagcggcgtagggagcgtttgcgtgtgagagagaga
gacagacaaagggagagggaacttgatcgggaacgtgaacgaggacaggaaagagttcgt
gaaagacaacgtatcatggaacgatgggaagaggagggagagcgagggcgcaaacgtgga
cttgaaaccaggcgtgatcgcattccaccaagaaaatctagggaccgccacgattcgtct
gtggcaaaggaggcaaaatctttgcgacaagattcccgacatcacgatactttgcatagg
catcattcaccggttaaagaaaaaaggagagaatatatttgcaaggtttactcatcaagt
ttggttgatgtggagagggattttttatcaatagataagagatatcctagactctttgtg
tctgctgaattttctaaggctgttgtcaactggccgaaggagaaccttaaacttcccatc
cacacacctgtcagctttgagcatgatgttttggaagaagagagggcaaaaggactgaag
gtgccatctgctgagcttttggttgaagaacctgctaaatctggaagtacagtgtggaat
gcgaagatgattttgatgagtggacttagcaagaacgctatggaggagctgtcatctgaa
aaaagttctgatgatcgcataccccacatttgcaatatcgtcaggtttggtgtgcttaga
agggaccagtcttggatggcaattggtggtccatgggattctgttgacggtggtgaccca
tcggttgatgacacctctttaattcgaacagtccttagatatgcaaaaaatattactcaa
cttgatttgcagcactgctgcaattggaatcggtttcttgagatacactacgacagagtt
ggaaaggatggactgtttagccacaaggaagttactgtgctgtttgttccagatttgtct
gaatgtctcccttcattggaagcatggagagaccaatggcttgctcacaagaaggatgtt
gcagggagagagcagcaagttgctttgaaaaaagagtggtctagggagaagaaagatggg
cttaaagataagcaaaaggattccacaaaagatgtaaaacgggtagacaaatcaggcaaa
gagaaagagtctgcacccttgggacaatcagaagatgttaacaaaaaggagaaagatgtc
aatgatgtgaaagcgataacagctgaagaaaaggctgatggaaatgacaagagacttgag
aaaaaagggggggctgaacaaggtgaggaaaacaagactctggaaaagaatgaacgggga
aaatctgttggtgctcagaaaagtggcagtgtgaaatctgggaagaaaaagattataaag
aagattgttagacagaaggttgttgataagacagctggtaacagtgccagcaatcaaaat
gacaagctggatgagaaggaaaatggaaagaacacaaactctgagattcccgatctacag
gatgctgactctggggctaaacattttgttagaaagaaggtgatgagaaagattccagtg
ggaaaaacagcacggaataaagatatgcaagataaacaaaatgataatttagatcccagc
agtgctgcagttgtggaaggtaccattgtaaaaaaaactgtgaagagaaaaataattaag
agggtggctaaaagaaaggtttctgttttgcaatccggtgatgcagttgctgacaataag
aaagatgctggcggagatgagataaaggtagttaggacagtagatgaaccagaaagtatg
gaggggcaagctgctaatacagaaaatcaagtcagtgagatcaaaagatctggaaagaaa
acagttgagcagaatgatgatgtggttgattcaagcaaaacagaaataaaggccaacaaa
gatgcaaaaagtgaaggtgagaaaagtggacagggggctaaactggagactcaggctgat
gagccgaaagcttcacagaatgctaaccatagtggcaaggggggaaaatcaaaagatgga
gaaaaatcgaaagatgggcaagagaaaaaagataacaatggaaaatatttgtctagaagc
agatcaaataaagaattgatagacaagaggaagcctgaagaacctcctcgacaccctgga
ttgattttacagacaaaatggagcacggattccaaacttcgttcagtgtcactttcactg
gattcactcttggattacactgacaaggacattgatgaagcatcatttgagttgtcatta
tttgctgaatcgttgtatgaaatgcttcagtatcagatgggttgtcggcttctaacattt
ctggagaaactacgcgtaaaattcgtaagaaaaagaaatcaacgtaagaggcaacagaat
gaagttcatgagatggaaagggacaaaaattcaccagctaagcgattgaagactaatgag
cactctgtgaaagacctatctattaagcctgaaatatctagtccagctgatatagatgat
gataaaactaaggccgaagaggataagtctgttgatcctctttatgagctgaagatggaa
gatgaaacagatggtgatgaagatccagaggaagatcctgaagaatacgaagaaacagaa
gagtctatgcaacgtgactcatatgatgcaaataaaaaagaagaggggaagaccaatgtg
aatgctgagcctgaaaaggtgttaggaatagaaaaagacgaagcagagaaatctcttaag
gtgaaaccgaaagctgtagagacgaatcccaagtctgacgaggaaatgtgtataaagaga
gaggcaacagtggattcgggagagagaggagaaacttctgccttcaaggaggtttctgtt
gacaaagaactattgcagcaggcttttagatttttcgaccggaatcgagttggctacatt
agggttgaagatatgagattgatcatccacaacttgggaaagttcctttcgcacagggat
gtcaaggagcttgtgcaaagtgcattgttagagagcaacactgctagggatgatcgcatt
ctctacaataagctggttcggatgtctggcatttga
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