Carya illinoinensis (pecan): 122313443
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Entry
122313443 CDS
T08745
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122313443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122313443
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122313443
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
IncFII_repA
Motif
Other DBs
NCBI-GeneID:
122313443
NCBI-ProteinID:
XP_042984391
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Position
6:1431030..1440411
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AA seq
708 aa
AA seq
DB search
MNDQHEKYARFQDWKSQKSTEGEYPEKYGMHPGRIRMAVNLVSEKIQRGFEFSLERINGI
GKSLRSYSFSNSVAKGSRLKKKILDPQGLFLQKWNKIFVLSCVIAVSLDPLFFYVPVIND
DKKCLDLDDKMKTTAIILRSFTDIFYVIHIIFQFRTGFIAPSSRVFGRGVLVEDAREIAT
RYLSSYFLIDILAVLPLPQVVILVIIPKMAGSKSLNTKNLLKFVVCFQYLPRCLRIYPLY
KEVTRTSGILTQTAWAGAVFNLFLYMLASHVFGAFWYLFSIERETTCWQQACGKNATCFN
SSLLCDDSIFLNNSCPVQTPNKTLFNFGIFLDALQSGVVESTDFPQKLFYCFWWGLRNLS
SLGQNLSTSTNVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQW
MSHRLLPEGLRERIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMF
EKMDEQLLDAMCDCLKPVLYTEKSYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSE
YLKAGDFCGEELLTWALDPHSSSNLPISTRTVQALTEVESFALKADDLKFVASQFRRLHS
KQLRHTFRLYSQQWRTWAACFIQAAWRRYKKKKLEESLQAEENRLQDALAKAGGSSPSLG
ATIYASRFAANALRLLRRDSTRKARVADRIPPILLQKPTEPDFASEEQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccaacatgagaagtatgcgaggtttcaggattggaagtcacagaaaagtacc
gagggggaatatcctgaaaagtatggaatgcatccaggaagaatcagaatggcagttaac
ttggtatcagaaaaaattcaaagaggttttgaatttagtttggagaggataaacgggatt
ggaaaatcattaagatcctattcatttagtaattctgtggctaaagggtctcgtttaaag
aagaaaattcttgatcctcagggtctattccttcagaagtggaataagatatttgtactc
tcatgtgtgattgcagtttcactggatcccttgttcttttatgtccctgtgattaatgat
gacaagaagtgccttgatttggacgataagatgaagactacagctattattttacgttct
ttcacagatatattttatgtgattcacattatttttcaattccgtaccggttttattgct
ccctcttctcgtgtgtttgggagaggtgttttagttgaagatgctagggaaatagcaacg
aggtatctgtcatcgtactttctaatcgacattcttgcagtccttccactcccacaggtg
gtcattttagttatcatcccgaaaatggctggctcaaaatcgttgaacacaaagaacttg
ctaaaatttgttgtttgtttccaatatctgccgaggtgtcttcgaatctatccattgtac
aaagaagttacaaggacttctggcatactcacacaaactgcttgggctggagctgtattc
aatctctttctttacatgcttgctagccatgtatttggagccttttggtacttgttctcc
atagaaagagaaactacatgctggcaacaagcctgtgggaaaaatgctacatgcttcaat
agctccttgctttgtgatgatagcatttttcttaataattcttgtccagtacagacacca
aataaaacactctttaattttggaatattccttgatgctcttcaatctggtgtcgtcgag
tcgactgattttccacagaagttgttttactgtttttggtggggcctgcgaaatctgagt
tctcttggtcaaaatctttcaacaagtaccaatgtctgggaaatctgctttgcagttttc
atttctatttcaggcttggtattgttttcatttctgatcgggaatatgcagacatacttg
caatccacaactacaagattggaggagatgagagtcaagaggcgagatgcagaacagtgg
atgtcacaccgtttactccctgaggggctgagagaacggattaggaggtatgaacaatac
aaatggcaagaaactagaggtgttgatgaagagaatttgcttagtaatcttccgaaagac
cttagaagggacataaagcgccatctctgcttggcactgctcatgagagtaccaatgttt
gaaaagatggatgaacagctgttggatgcaatgtgtgactgtcttaagccagttttgtac
accgagaaaagctacattgtccgggagggagacccagttgatgagatgctcttcatcatg
cgaggcaagctattgacaatgactaccaatggtggaagaactggtttcttcaactctgag
tatctcaaggccggtgacttctgtggagaagaacttcttacttgggctctggatcctcat
tcttcatccaacctacccatctcaacaagaactgtccaggcccttacagaagtcgaatcc
tttgctctaaaagctgatgatttgaagtttgtagcctctcagttccggcggctccatagc
aagcaacttcgccatactttcaggctttattctcagcaatggaggacttgggccgcttgt
ttcatccaggcagcctggcgccgctataaaaagaaaaagcttgaagagtctcttcaggca
gaggagaatagattgcaagatgcattggccaaggctggagggagctcgccgagtttaggt
gccaccatttatgcctcgcggtttgctgctaatgcacttcgtttgttacggcgagatagt
acacgcaaggcaagggtggcggatagaattccacctattttacttcagaaaccaacggag
cccgattttgcttctgaagaacagtag
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