Carya illinoinensis (pecan): 122313553
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Entry
122313553 CDS
T08745
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122313553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122313553
03051 Proteasome [BR:
cill03051
]
122313553
Membrane trafficking [BR:
cill04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
122313553
Proteasome [BR:
cill03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122313553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
Mod_r
Dsc3_N
XPC-binding
Ubiquitin_2
Rad60-SLD_2
Ubiquitin_5
HOIP-UBA
CHASE3
Motif
Other DBs
NCBI-GeneID:
122313553
NCBI-ProteinID:
XP_042984595
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Position
6:complement(31198818..31203477)
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AA seq
561 aa
AA seq
DB search
MGGVGDSSEPRVGGGGGEEEQVVPINIRCSNGSKFAVRTSIQSTVSAFKAVLAQNCDVLA
DQQRLIYKGRILKDDQTLESYGLQAEHTVHMVRGFSSAGSTPAAAANVTATGNTGSPNNS
PGVTRGVGSNEGGGLGNAGLGASLFPGLGFNALGSGEAPDLFGAGLPEFERVQQQLTQNP
NMMREIMNMPAMQSLMSNPDLMRSLIMNNPQMREIIDRNPELAHVLNDPGILRQTVEAAR
NPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMGGNAGNDSNSNPFA
ALFGNQGGTQVRDGANNPSTTGSETTSGLISPNTNPLPNPWNNTSGGTQTTTTQPNPAGD
ARAPVIGGLGGLGLPNMEHMLNGMPDATLMNQFLQNPAVSQMMQSLLSNPQYMNQILSLN
PQLRGMVDTNPQLREMMQNPDLLRQLTNPETMQQMLALQQSLTSRLTQRQSTLDQAQTGG
TPGAPNNAALEMMMNMFGGLGAGSLTVPNNPDVPPEELYATQLSQLQEMGFFDTQENIRA
LRATAGNVHAAVERLLGNSGL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcgtgggtgattcgagtgagccgagagtcggtggtggtggtggtgaagaagaa
caagtggtgccgatcaatatccggtgctccaacggttcgaaattcgctgtgaggaccagc
atccagtccaccgttagcgcattcaaagcggttttggctcagaattgcgacgtcctagct
gatcagcagaggttgatttacaaaggtcgcatcttgaaagatgatcaaaccctagaaagc
tatggtttgcaggcagaacacactgttcacatggttcgtgggttttcttcagctggatca
actcctgctgctgctgcaaatgtaactgctacgggtaacactggaagtccaaacaacagt
ccaggtgttacacgtggtgttggttcaaatgaaggtgggggattgggaaatgctggtctt
ggtgcatctttatttcctggacttggcttcaatgcgctaggcagtggggaggctcctgat
ttgtttggagctggactgccagagtttgaacgagtgcagcaacaattgactcagaatcca
aacatgatgagggaaataatgaacatgcctgccatgcagagcctaatgagcaaccctgac
ttaatgcgcagcttgattatgaacaatcctcagatgcgtgagatcatcgaccgtaatcca
gagcttgctcacgtacttaatgaccctgggattctgcgacagacggtagaagctgcaagg
aaccctgagcttatgcgtgagatgatgcgaaacactgacagggcgatgagcaacattgaa
tcttccccagagggatttaacatgctcagaagaatgtatgaaaatgttcaggagccattt
ctgaatgctacaactatgggtggaaatgctggtaatgattcaaattcaaacccgtttgca
gcactttttggaaatcaaggtgggacacaagttagggatggtgctaataacccctcgact
actggttctgaaacaaccagtgggcttatttctccaaatacaaacccactccctaaccct
tggaacaatacctctggaggtacgcagacaacaactacgcagccaaatcctgccggggat
gcaagggcacctgttattggtggtcttggagggcttggtctccccaatatggagcacatg
ctcaatggaatgccagatgctactttaatgaaccagtttttgcaaaacccagctgtatca
cagatgatgcaaagcttgctctctaatccccaatatatgaatcagattctcagcctcaat
ccgcaactacgtggcatggtagatacaaaccctcaattaagagaaatgatgcaaaaccca
gatcttctacgtcaattaactaaccctgagacaatgcagcaaatgctagctttacagcaa
tcactcacgtctcggcttactcaacggcaatcaacgttggatcaagctcaaaccggtggg
actccaggagcaccgaataatgctgcactggagatgatgatgaacatgtttggaggtctt
ggagctgggagcttgactgttccaaataacccagatgtacccccggaggaactgtatgca
actcaactttcacagcttcaagaaatgggtttctttgatactcaggagaatatcagggca
ctgcgtgctaccgcggggaatgtccatgctgcggtggagcgacttttggggaattccggg
ctataa
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