Carya illinoinensis (pecan): 122317226
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Entry
122317226 CDS
T08745
Name
(RefSeq) ABC transporter B family member 13-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122317226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122317226
04147 Exosome [BR:
cill04147
]
122317226
04090 CD molecules [BR:
cill04090
]
122317226
Enzymes [BR:
cill01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122317226
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122317226
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122317226
CD molecules [BR:
cill04090
]
Proteins
122317226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
Zeta_toxin
ABC_ATPase
RsgA_GTPase
DUF87
AAA_21
AAA
AAA_23
P-loop_TraG
nSTAND1
AAA_30
Motif
Other DBs
NCBI-GeneID:
122317226
NCBI-ProteinID:
XP_042990133
LinkDB
All DBs
Position
7:complement(34753498..34759742)
Genome browser
AA seq
1250 aa
AA seq
DB search
MEEVELATNNGPTLMHQNPAPEMGEPSNSSKKKSISFLGLFSAADSIDYVLMFFGSIGAC
IHGAALPVFFVLFGRMIDSLGHLSEHPHMLSSRVSEYSLYLIYLGLVVLASAWIGVALWM
QTGERQTARLRLKYLQSVLKKDIDFFDTDAGVTNIIYHISSDAILVQDAIGDKTGHTLRY
LSQFIVGFSIGFTSVWQLSLLTLAVVPLIAFAGGAYTVIMSTLSEKGEAAYAEAGKVAEE
VISQVRTVYSFVGEDKAVEAYSKSLKKALKLGKKSGLAKGVGVGFTYGLLFCAWALLLWY
AGILVRHRDTNGGKAFTTIINVIFSGFALGQATPNLAGIAKGRAAAANIISMIETDSKSS
KTSDTGLVLPEIAGQIDFSEVCFAYPSRRNLVFNKLSFSISAGKTFAVVGPSGSGKSTII
SMVQRFYEPTSGRILLDGRDLKSLDLKWLREQMGLVSQEPALFATTIASNILFGKRDADM
DDVIQAAKAANAHSFIQGLPGDYDTQVGEAGTQLSGGQKQRIAIARAVLRNPKILLLDEA
SSALDAESEFLVQQALDEIMSHRTTIIVAHRLSTVRNADTIIVLKNGQVVESGTHSDLIS
KNGEYATLVSLQVSEHVKESSLLSGYGSSNNSSFRGSVSSRNSSFRDLPRQLESKLISTS
DQNLLPIKRTPSIWELLTLNAPEWPYAVLGSVGAVLAGMEAPLFAFGITHILTTFYSPDV
SQMKHEVERMALIFVGVAVVTIPIYLLQHYFYTLMGERLTTRVRLSMFSAILSNEVGWFD
LDENNTGLLTSILAADATLVRSALADRLSTIVQNVALAVTAFVIAFMLSWRIASVVVASL
PLLIGASITEQLFLKGFGGDYTRAYSRATAVAREAIANIRTVAAFGAEDEISMQFASELN
QPKKQALVRGHISGFGYALSQFFAYCSYALGLWYASILIKHKDANFGDIMKSFMVLIITA
LAIAETLALTPDIVKGSQALGSVFGILKRKTAIDSNNPTSKMVTHVKGNIEFRNVCFKYP
ARPDITIFEDLNLRVSSGKSLAVVGQSGSGKSTVIALVMRFYDPTFGTVLIDGYDIKRLN
LKSLRRKIGLVQQEPALFSTTIYENIKYGNEQASEIEVMKAAKAASAHEFISRMPEGYKT
QVGEKGVQLSGGQKQRVAIARSMLKDPAILLLDEATSALDTASEKLVQEALNKLMEGRTT
ILVAHRLSTIRDADRIAVLQNGRVIEIGSHEHLSRKPGSIYGQLVSLQQE
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtagagcttgcaaccaataatgggcctacacttatgcaccagaatccagct
ccggaaatgggagagccaagtaattcaagcaaaaagaagagcatttcgtttcttggccta
ttttctgctgctgattcaattgactatgtattgatgttcttcggaagtatcggggcatgc
atccatggcgctgctcttcctgtgttctttgtgttgttcggtcgtatgattgattctttg
ggacatctatccgagcatcctcacatgttgtcttcgcgggtttccgagtattctctgtac
ttgatctatcttggactcgtagttttggcatcagcatggataggcgtcgcactctggatg
caaactggagagaggcagactgctcgtttgagactgaagtatctccagtcagtattaaag
aaggatatcgatttttttgacactgatgccggagttactaatattatttaccacatttct
agtgatgcaatactagtgcaagatgcaattggtgacaagacaggccatactctgcgttac
ctttctcagttcattgttgggttttccattggatttacatcggtgtggcagctttcactt
ctcaccttggctgttgttccattgatagctttcgcagggggagcttataccgttatcatg
tctaccttatcagaaaaaggtgaggctgcgtatgctgaagctggaaaggttgcagaagag
gttatttcgcaggttcgtacagtttactcgtttgtaggagaggataaagcagttgaagca
tactctaagtcactaaagaaagctctaaaactggggaagaaaagcgggttggcaaaagga
gtgggtgtaggcttcacgtatgggcttttattttgtgcgtgggcattgcttctctggtat
gccggtatacttgtcaggcatcgggacacgaatggagggaaggctttcactacaattatc
aatgtcatcttcagtggatttgctctaggccaagctactccaaaccttgctggcattgct
aaaggaagggcagctgcagccaatatcataagcatgattgaaacagattccaagtcttct
aagacatcagataccggattggtattgccagaaatcgctggtcaaatcgactttagcgag
gtctgttttgcttatccttcacgacgaaatttggttttcaacaagttgagcttttcaatc
agcgctggcaagacctttgctgtagttggtccaagcggctccggaaagagcactatcatt
tccatggttcaacgtttctatgaacccacttcaggtagaatactgttggatggacgcgat
cttaaaagtcttgacttgaaatggttgagggaacagatgggattggttagccaagagcca
gcactattcgccacaaccatagctagcaatattctgtttggtaaacgagatgcagacatg
gatgatgtcatacaagctgctaaagctgcaaatgcccactctttcattcaaggcttacct
ggcgattacgatactcaggtaggagaggctggaactcagctttcaggagggcaaaagcag
agaattgctattgcaagagcagtgctgagaaacccaaagatactacttctagatgaagcc
agcagtgctcttgatgcagaatcagaatttttagttcagcaggcactagatgaaatcatg
tcccatcggactacaattatcgttgcacatcggctatccaccgtacgaaatgctgataca
attatagtgttgaagaacggccaggttgtagaaagtgggacgcactcagacttgatatct
aagaatggcgagtatgcaactctagtgagcttgcaagtatcagaacatgttaaagagtcc
agtttattatctggctatggaagctcaaacaattcaagctttagaggctcagtaagctcg
agaaattcaagctttcgagacctaccccgtcagctggaatcaaagttgattagcacaagt
gatcaaaatctgttaccaataaagcgcactccctcaatttgggaactacttacactaaat
gcacctgagtggccctacgcagtacttggctcagtgggtgcagttctggctggcatggaa
gctcccctgtttgcctttggaatcacacatatcttgactacattttactcccctgatgtt
tctcaaatgaaacatgaagttgaacggatggctcttatatttgttggagtggcagttgtt
actattcccatatacctgctgcaacactacttctacacgttgatgggagagcgtctcact
acccgtgtgcgcttatcaatgttctcagctatcctttccaacgaagttggctggtttgat
ttggatgagaataatacgggcttactgacttctattttagcagccgatgcaacattagtc
agaagtgctcttgctgaccgtctatcaacaattgtgcagaatgtagcactcgctgtgact
gcatttgtaattgcctttatgttaagttggcgcatagcatctgtcgttgttgcctccctc
cccctacttattggagcttcgattactgagcaactatttctcaagggatttggaggagac
tacacccgtgcctattctagagcaactgctgtggcacgtgaagcaattgccaatatacgc
actgttgcggcatttggtgctgaagatgagatctcgatgcagtttgcttctgaactaaac
caaccaaaaaaacaagcacttgtacgaggccatatatccggttttggctatgctttatcg
cagttctttgcatattgttcatatgcacttggcctttggtatgcgtcaattctaatcaag
cataaagatgcaaactttggagacatcatgaaatctttcatggttttgataatcactgca
ttggcaatagcagaaacacttgctcttacacctgacattgtgaaagggtcgcaagcactg
gggtcagttttcggtattcttaaaaggaaaacagctatcgactccaataatccgacctca
aaaatggtaactcatgtcaaggggaatatagaattcaggaatgtgtgtttcaagtatccg
gcaaggcctgatatcaccatttttgaggacttgaacttgagagtctcatcgggaaagagt
cttgctgtagtgggacaaagtggctcggggaagagtactgtgattgcactggtaatgaga
ttctacgaccccactttcggaacagtcttgattgatggatatgacattaaacgcttgaac
ttgaaatccttaaggcggaaaataggtttggttcagcaagagccagcattgttctccaca
acaatttacgagaacatcaagtatgggaatgagcaggcatcagaaattgaggtaatgaag
gcagcaaaagcagcaagtgcccatgaattcatcagtagaatgcctgaaggttacaaaact
caagttggtgagaagggagttcagttatcaggtggccagaaacaaagggtagcaattgcc
agatcaatgctgaaagacccggccattcttctcttggatgaagcaacaagtgcattggac
actgcatcagagaagctggtccaagaggctcttaacaagcttatggagggccgaacaaca
attctggtggcacatagattgtcaaccattcgtgatgcagaccgtattgctgtgctgcaa
aatggcagggtgattgaaattggcagccatgagcacctcagtagaaagccgggtagtatc
tatggacaactagtcagtctacaacaggaataa
DBGET
integrated database retrieval system
