Coccidioides immitis: CIMG_00178
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Entry
CIMG_00178 CDS
T01114
Name
(RefSeq) ATP-dependent RNA helicase DBP5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cim
Coccidioides immitis
Pathway
cim03013
Nucleocytoplasmic transport
cim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CIMG_00178
03015 mRNA surveillance pathway
CIMG_00178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_00178
Enzymes [BR:
cim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CIMG_00178
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CIMG_00178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF3217
CMS1
AAA_11
Motif
Other DBs
NCBI-GeneID:
4567941
NCBI-ProteinID:
XP_001246407
UniProt:
Q1EB85
LinkDB
All DBs
AA seq
495 aa
AA seq
DB search
MASENTTETPSVPAGGPLAARISRPEGDANPPSTEAEKPAAEDDSGKGPSIPQVDGASED
QRGSELQDSEFDVNVKLSDLQADPNNPLYSIKSFEELGLAEPIQMGLSKMNFRRPSKIQE
RALPLLMANPPTNMIAQSQSGTGKTAAFVLNILSRLELTPEKQKSPQALVLAPSRELARQ
IVGVIQAMGTFVEGLFVATAVPMEMNRNQRVEASIVVGTPGTVQDLIKKRLFNTQHLRVL
VLDEADNMLDQQGLGDQCIRVKSLLPRTIQVVLFSATFPDFVVRYAHKFAPNSNQLTLKH
EELTVEGIKQLYLDCESDEHKYEILVKFYGLLTIGSSIIFVKTRASAAEIERRMVAEGHT
VVSLTGGIEGQKRDEIIDRFRNGTAKVLITTNVLARGIDVSTVSMVINYDIPELHLPGAA
RRMADAQTYLHRIGRTGRFGRVGVAVSFVSNQEEWQMLQDIQKYFSTNIERVDTRDWDDV
EKKVKKIIKPSAVAR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgaaaacacaacagaaacacccagtgtaccagctggcgggccacttgcagct
cggatctccagaccagagggcgatgccaacccaccttctaccgaggcagagaagccggcc
gctgaggatgattccggaaaaggcccttcgatcccacaagtggacggagcttcagaggat
cagcgtggctctgaattacaggattccgaatttgacgtcaatgtcaagctgagcgatttg
caagcggatccgaataaccccctctattccatcaagtcgtttgaggagctaggcctagcg
gaacctattcaaatggggctgtccaagatgaacttccgtcgtccttccaagattcaggag
agagccttaccgcttctcatggcaaaccctccgacaaacatgatcgcccaatcgcaatct
ggtaccggaaagacagcagcgttcgttttgaatatccttagtcgcctcgagttgaccccg
gagaagcagaaatccccccaagccttagttcttgcaccgagtcgagaactggcaagacaa
attgttggagtcattcaagcaatgggaacatttgtcgaaggactctttgtggcgaccgct
gttcccatggaaatgaatcgcaatcaaagggtcgaagcatccatagtcgttggcacgcct
ggaactgttcaagacctcattaagaagagactattcaacacacagcatctcagagttttg
gtcttggatgaggcagacaatatgttggatcagcaaggtcttggtgatcaatgcattaga
gtgaaaagtttgctgccaagaacaattcaggtcgtcctgttttccgcaaccttccctgac
tttgttgttcggtatgcacataaattcgcgccgaattcaaaccaactgacgcttaaacac
gaggaacttaccgttgaaggcattaaacaactctacttggattgtgaatcagatgagcat
aagtatgaaattttggttaagttctatggactgcttacaattggatcttctatcattttt
gtcaagacacgtgcttcagctgcggagatcgagcgacgtatggtggcagaaggtcataca
gtagtttctttgaccggtggtatcgaaggacaaaagcgcgatgaaatcatcgatcgcttc
cgcaatggcacagcgaaggtcctcataacgaccaatgttttagctcgaggaattgacgtg
tccactgtttcaatggttatcaactatgatattccggaactacaccttcctggggcagct
cgccgcatggcggatgcacaaacctaccttcaccgcatcggacgtactggccgcttcgga
cgcgttggtgtggccgtgtcattcgtttctaaccaggaggaatggcaaatgctccaggat
atccagaaatacttcagcaccaacatcgagcgcgttgatacccgagattgggacgatgtg
gagaagaaggtcaagaaaataattaagccttctgccgttgcccgttaa
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