Coccidioides immitis: CIMG_08634
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Entry
CIMG_08634 CDS
T01114
Name
(RefSeq) nuclear matrix protein
KO
K12878
THO complex subunit 1
Organism
cim
Coccidioides immitis
Pathway
cim03013
Nucleocytoplasmic transport
cim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CIMG_08634
09122 Translation
03013 Nucleocytoplasmic transport
CIMG_08634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_08634
03041 Spliceosome [BR:
cim03041
]
CIMG_08634
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CIMG_08634
Spliceosome [BR:
cim03041
]
Complex C
Other components
EJC/TREX
CIMG_08634
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CIMG_08634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
4560344
NCBI-ProteinID:
XP_001241471
UniProt:
A0A0E1RVE9
LinkDB
All DBs
AA seq
629 aa
AA seq
DB search
MAVGDIRAVQIYRRRVQVLLDRATKVKQGSEIEPPITESDLGDAINEVDDGEEEALKNQS
SQPAYAAVETAFREKFYHLLATTSINKPEFVHMWNLLDVVSIFSDNERCEPGLIFWLIEE
LLDSQTIDGCRKVFDYLESRRERNTAKHFKQKSLIILRSCNELLRRLSRAEDTVFCGRVF
IFLFQSFPLGDKSSVNLRGEYHTENVTTFDEPPKHIAANEGADDVEMKDAEAQKPSDNSS
KTDAASQGGSVSAEIDGQRSQQSTDHQAEDTSIDMDALYPVFWGLQANFSAPTRLFDHEH
FASFKKGLESTISSFQKVSIDLEKRGMTKGSEETSRRGLKRKRGETGPETANTFNPKYLT
SRDLFELEVNDVAFRRHILVQSLILLDFLISLSPKAKAKLADATNKSVLYGYVLSDEDAK
WANQMKSSIASYLQQGLDGKFYYRMVDTVLTRDKNWVRWKAEGCPPIEKPPIQIQDYLDT
QSSTTKLTTNKRLRATPLGSLDLKFLSEEANLGNLDRLMEPGRFRNPGAESYMRGITDDE
FNLDMAQNSDEKEEAAKAKASKIWRVLRLSSRSKLNRFDKIEDGRNLKVLFENPPPPEKA
VAEAEDGADGHKDDSVKNPPTKENDALTE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcggggacattcgcgctgttcagatctatcgaagacgtgttcaggtactgctg
gacagagcgacgaaagtgaagcagggctccgaaatagaaccgccgataacagagtctgat
ttgggagatgcaatcaacgaagttgatgacggcgaagaagaggcgttaaagaaccagagt
tcccagccggcttatgcagcagtagagacagctttccgcgagaagttttatcacttactg
gccacgacgtctataaacaagcccgagtttgttcacatgtggaatctacttgatgtcgtg
tctatattctccgacaatgagcgatgcgaacccggtcttattttctggctcatagaggag
ctactcgatagtcaaaccatcgacggctgccgtaaagtattcgactatttagaatccagg
cgggaacgtaatacggctaaacatttcaagcagaagagcttaattattctccgttcatgc
aatgaattgctgcgacgactctcacgagcggaagatacggtattctgcggacgggtgttc
atttttctctttcaatcatttcctttgggagacaagagctcggttaatttgcgaggagaa
tatcatacagaaaacgttacaacatttgacgaaccgccaaaacacatcgctgccaatgaa
ggcgccgacgatgtagagatgaaagatgcagaagcgcaaaagccttcagacaactcatca
aaaacggacgcagcttctcaaggaggttctgtctccgccgaaatcgatggtcagcgatca
cagcaatcgaccgatcaccaagctgaagatacatcgattgatatggacgctttatatccg
gtattctggggattacaagcgaacttttcggctcctacgcggctttttgatcacgagcat
tttgcttctttcaaaaaggggctcgaatccaccatttcaagtttccaaaaggttagcatt
gacttggaaaagcgcggtatgacaaagggctcagaagaaacatcacggcgtgggctgaag
cggaagcggggtgaaaccgggcctgaaaccgcaaatacattcaacccaaaatatctcacg
agccgggacttgttcgaattagaggttaacgacgtcgcatttcgaagacatatacttgtc
cagtcgcttattcttctcgatttcctaatttctctctcaccgaaggcgaaagccaaactt
gcggatgctacaaataaatcagttctctatggctatgtgcttagcgacgaagatgcgaaa
tgggcaaatcaaatgaagtcctccatcgcgagctacctgcagcaaggtctcgatgggaag
ttctattatcgcatggtagataccgtcctgacgagagataaaaactgggtccgttggaag
gccgaaggatgcccacctattgagaaacccccaattcaaattcaagactatctagatacc
cagtcctctactaccaaattaactacaaataaacggctccgggcgacgccacttggctcc
ttggaccttaaattcttgtcggaagaagcaaatttaggcaatcttgatcgcctcatggag
cctggcaggtttagaaatccaggggccgagtcatacatgcggggtatcacggacgatgaa
ttcaatctcgacatggctcaaaacagtgacgaaaaagaagaagctgcaaaagcaaaagca
agcaagatatggagagtcttacggctgtcctcgcgcagcaagttgaatcggttcgataaa
atcgaagacggcagaaatttgaaggtcctttttgaaaatccgcctcctccggagaaggcg
gttgcggaagcggaagatggagctgatggtcataaagacgactcggtaaagaatccgcca
accaaggagaatgatgctcttacggagtga
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integrated database retrieval system
