Cebus imitator (Panamanian white-faced capuchin): 108282924
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Entry
108282924 CDS
T08783
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03013
Nucleocytoplasmic transport
cimi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108282924 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
108282924 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108282924 (THOC1)
03041 Spliceosome [BR:
cimi03041
]
108282924 (THOC1)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108282924 (THOC1)
Spliceosome [BR:
cimi03041
]
Complex C
Other components
EJC/TREX
108282924 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108282924 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
108282924
NCBI-ProteinID:
XP_017354471
Ensembl:
ENSCCAG00000025766
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNIKNIKPLLSTFSQVPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRIIRKRTAPE
DFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaagtct
accagagaggccttgaacatcaaaaacatcaagccattgttaagtaccttcagccaggta
cctggcagtgaaaatgaaaaaaaatgtacccttgatcaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcctaagaagattatcgaaatcccagaatacagtcttctgtggacgaattcag
ctctttttggctaggcttttccctctatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggtcag
aagcacactgaagatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgag
gaagctccaacaacgtgctctattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
ctcaagtattctgaagaagtgttagctgtttttaagagttacaaactagatgatactcag
gcctcaagaaaaaagatggaagaattgaaaacaggaggagagcatgtatattttgcaaaa
tttttaacaagtgaaaagctgatggatttacaactgagtgacagtaactttcgtcgacac
atcctgttgcaatatctcattttattccaatatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgaacaatcactttggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggttgcccaagttttgtg
aaagaaagaacatcagataccaaacctacgagaataattcggaagagaacagcacccgag
gacttcctagggaaaggacccagcaaaaaaattctgatgggaaatgaggagttaacaagg
ctttggaatctttgtcctgataatatggaagcctgcaaatcagagacaagggaatatatg
cccactttggaggaattctttgaagaagccatcgaacaggcagaccctgaaaatatggtt
gaaaatgaatataaggctgtgaacaattcaaattatggttggagagccctgagactatta
gcacggagaagtcctcacttcttccaaccaaccaaccagcagtttaaaagtttaccagaa
tatcttgaaaatatggtaataaagctagccaaggaattaccgccgccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctgtaacaggagaacaaatagaggtatttgccaacaag
ctgggtgagcaatggaagattctggctccctacttggaaatgaaagactcagaaattagg
cagattgagtgtgacagtgaagacatgaagatgagagctaagcagctcctggttgcctgg
caagatcaagagggagttcatgcaacgcctgagaatctgattaatgcactgaataagtct
ggattaagtgaccttgcggaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
