Cebus imitator (Panamanian white-faced capuchin): 108284793
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Entry
108284793 CDS
T08783
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108284793 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108284793 (LIG4)
Enzymes [BR:
cimi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
108284793 (LIG4)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
108284793 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
108284793
NCBI-ProteinID:
XP_017357169
Ensembl:
ENSCCAG00000019971
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKTKGRAEKIRHFREFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLVKKSVLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIANIEHIEKDMKHQTFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD
QFGASPAEGSLTPFIHNAFQTDIQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRFEILNSIFTPIPGRIEIVQKTQAHTKDEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGKKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWRPFHKRTPPSSILC
GTERPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKASGKLASKHLYLGDDDEPPEKKRKAPPKMKKVIGIIEHLKAPNLTNVNKISNIFE
DVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIILSNKHDV
VKPAWLLECFKTKSFVPWQPCFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSNEQTPEEITSVIADLEHRYSWDCSPLSMFRRHTIYLDLYAVINDLSTKTEGTRLAI
KALELRFHGGTVVSYLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKDSWVTDSIDK
CKLQEESQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcacaaactgttgcatctcacgttccttttgcagatttgtgt
tcaactttagaacgaatacagaaaactaaaggacgtgcagaaaaaatcagacactttagg
gaatttttagattcttggagaaaatttcatgatgctcttcataagaaccaaaaagatgtc
acagactctttttatccagcaatgaggctaattcttcctcagctagaaagagagagaatg
gcctatggcattaaagaaactatgcttgctaagctttatattgaattgcttaatttacct
agagatggaaaagatgccctcaaacttttaaactacagaacgcccactggaactcatgga
gatgctggagactttgcaatgattgcatattttgtgttgaagccaagatgtttacagaaa
ggaagtttaaccatacagcaagtaaatgaccttttagactcaattgccagcaataattct
gctaaaagaaaagacctagtaaaaaagagtgttcttcaacttataactcagagttctgca
cttgagcaaaagtggcttattcggatgatcataaaggatttaaagcttggtgttagtcag
caaactatcttttctgtttttcataatgatgctgctgagttgcataatgtcactacagat
ctggaaaaagtctgtaggcaactgcatgatccttctgtaggactcagtgatatttctatc
actttattttctgcctttaagccaatgctagctgctattgcaaatattgagcacattgag
aaggatatgaaacatcagactttctacatagaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggggatgtatataaatacttctcccgaaatggatataactatactgat
cagtttggtgcttctcctgctgaaggttctcttaccccattcattcataatgcattccaa
acagatatacaaatctgtattcttgatggtgagatgatggcctataatcctaatacacaa
actttcatgcaaaagggaattaagtttgatattaaaagaatggtagaagattctgatctg
cagacttgttattgtgtttttgatgtattgatggttaataataaaaagctagggcatgag
actctgagaaagaggtttgaaattcttaatagtatttttacaccaattccaggtagaata
gaaatagtgcagaaaacacaagctcatactaaggatgaagtaattgatgcattgaatgaa
gcaatagataaaagagaagaaggaatcatgataaaacatcctctgtccatctataagcca
gacaaaagaggtgaagggtggttaaaaattaaaccagaatatgttaatggactaatggat
gaattggacattttaattgttggaggatattggggtaaaggatcacggggtggaatgatg
tctcattttttgtgtgcagtagcagagaagccccctcctggtaaaaagccatctgtgttt
catactctctctcgtgttggctctggttgtaccatgaaagaactgtatgatctgggtttg
aaattggccaaatactggaggccttttcataaaagaactccaccaagtagcattttatgt
ggaacagagaggccagaagtgtatattgaaccttgtaattctgtcattgttcagattaag
gcagcagagatagtacccagtgatatgtataaaactggctgtaccttgcgttttccacga
attgagaagataagagatgacaaagagtggcatgagtgcatgacactggatgacctagaa
caacttaggggaaaagcatctggaaagcttgcatctaaacacctttatttaggtgatgat
gatgaaccaccagaaaaaaagcgaaaagctcccccaaagatgaaaaaagttattggaatt
attgagcacttaaaagcacctaaccttactaatgtaaacaaaatttctaatatattcgaa
gatgtggagttttgtgttatgagtggaacagatagccagccaaaacctgacctggagaac
agaattgcagaatttggtggttatatagtacaaaacccaggcccagacacatactgtgta
attgcagggtctgagaacatcagagtgaaaaacataattttgtcaaataaacatgatgtt
gtcaagcctgcatggcttttagaatgttttaagaccaaaagctttgtgccatggcagcct
tgctttatgattcatatgtgcccatcaaccaaagaacatttcgcccgtgaatatgattgc
tatggtgatagttattttgttgatacagacttgaaccaactgaaagaagtattctcagga
attaaaaattctaacgagcagactcctgaagaaattacttctgtgattgctgatttagaa
catcggtattcctgggattgctctcctctcagtatgtttcgacgccacaccatttatttg
gacttgtatgctgttattaatgacctgagtaccaaaactgaggggacaagattagctatt
aaagccttggagcttcgatttcatggaggaacagtagtttcttatttagctgagggagtg
tctcatgtaatcattggtgaagatcatagtcgtgttgcagattttaaagcttttagaaga
acttttaagagaaagtttaaaatcctaaaagacagttgggtaactgattcaatagacaag
tgcaaattacaagaagaaagccaatatttgatttaa
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