Cebus imitator (Panamanian white-faced capuchin): 108289836
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Entry
108289836 CDS
T08783
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108289836 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cimi04054
]
108289836 (DHX58)
Enzymes [BR:
cimi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108289836 (DHX58)
Pattern recognition receptors [BR:
cimi04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
108289836 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_19
Motif
Other DBs
NCBI-GeneID:
108289836
NCBI-ProteinID:
XP_017364917
Ensembl:
ENSCCAG00000022542
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MELRPYQQEVITPALEGKNIIIWLPTGAGKTRAAAYVARQHLETVDGAKVVVLVNRVHLV
TQHGEEFSRMLDGRWTMTTLSGDVGPRAGFGHLARCHDLLICTAQLLQMALTSPEEEEHV
ELTAFSLIVVDECHHTHKDTVYNVIMSRYLELKLQRARPLPQVLGLTASPGTGGASKLDG
AINHVLQLCANLDTWCIMSPQNYFSQLQEHNQQPCKQYDLCQRRSQDLFGDLLKKLMDQI
HDHLEMPELSRDFGKQTYEQQVVKLSETAALAGLLEQRVYALHLRRYNDALLIHDTVRAV
DALAALQNFYQREHATKTQILCAERWLLALFNEHKNMLAHLATHGLENPKLEMLEKILQK
QFRSSDRPRGIIFTRTRQSAHSLLLWLQQQRGLQTVDIRAQLLIGSGNSSQSTHMTQKDQ
QEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARAGQSVYS
FVATKGSRELQRELINETLETLMEQAVAAVQKMDRAEYQAKIQDLQQAAVTKRVAQAAQR
ESQRRQFPMEHVQLLCINCMAAVGHGSDLRKVEGAHHVNVNPNFSIYYNVSREPVVINKV
FKDWKPGGVISCKNCGEVWGLQIIYKSVKLPALKVRSMLLQTPQGRIQAKKWSRVPFPVP
DFDFLQHCAQNLTDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcggccctaccaacaggaggtgatcacgcctgccctggagggcaagaatatc
atcatctggctgcccactggtgctgggaagacccgggcagctgcttatgtggccaggcag
cacctagagactgtggatggagccaaggtggttgtattggtcaacagggtgcacctggtg
acccagcatggtgaagagttcagccgcatgctagatggacgttggaccatgacaaccttg
agtggggacgtggggccacgtgctggctttggccacctggcccggtgccatgacctgctc
atctgcacagcacagctgctgcagatggcactgaccagccctgaggaggaggagcacgtg
gagctcacggccttctccctgatcgtggtggatgagtgccaccacacccacaaggacact
gtctacaacgtcatcatgagccggtacctagaacttaaactccagagggcacggcccctg
ccccaggtgttgggtctcacagcctccccaggcaccggcggggcctccaagctcgatgga
gccatcaaccacgtcctacagctctgtgccaacttggacacgtggtgcatcatgtcaccc
cagaactacttctcccagctgcaggagcacaaccagcagccttgtaaacagtacgacctc
tgccaaaggcgcagccaggatctgtttggggacttgctgaagaagctcatggaccaaatc
cacgaccacctggagatgcccgagttgagtcgggactttgggaaacagacgtatgagcag
caggtggtgaagctgagcgagactgcggctttggctgggctcctggagcagcgggtttac
gcgcttcacctgaggcgctacaatgacgcactcctcatccacgacaccgtccgcgccgtg
gacgccctggctgcgctgcagaatttctatcaaagggagcacgccactaaaacccagatc
ctgtgtgctgagcgctggctgctggccctgttcaatgagcacaagaatatgctggcccac
ttggcaactcatggcctggagaatccaaaactggagatgctggaaaagatcctgcagaag
cagttcaggagctctgacagaccccggggcatcatcttcacccgcacccgccagagcgcg
cactccctcctgctctggctccagcagcagcggggcctgcagactgtggacatccgggcc
cagttactgattggatctgggaacagcagccagagcacccacatgacccagaaggaccag
caagaagtgatccggaagttccgagatggaaccctgaaccttttggtggccacgagtgtg
gcggaggaggggctggacatcccacagtgcaacgtggtggtgcgctatgggctcctaacc
aatgagatctccatggtccaggccagaggtcgtgcccgagcgggtcagagtgtgtactca
tttgtagcaactaagggtagccgggagctgcagcgggagctgatcaacgagacgctagag
acgctgatggagcaggcagtggctgctgtgcagaaaatggaccgggctgagtaccaggcc
aagatccaggatctgcagcaggcagccgtgaccaagcgggtagcccaggcagcccagcgc
gagagccagcggcgacagttccccatggagcatgtgcagctactctgcattaactgcatg
gcggccgtgggccacggcagtgacctgcggaaggtggagggtgcccaccatgtcaacgtg
aaccccaacttctcgatctactataacgtctccagggagcctgtggtcatcaacaaagtc
ttcaaggactggaagcctgggggtgtcatcagctgcaagaactgtggggaggtctggggt
ctgcagataatctacaaatcagtgaagctaccagcgctcaaagtccgcagcatgcttctg
cagacccctcaagggcggattcaggccaaaaagtggtcccgcgtgcccttccctgtgcct
gactttgacttcctgcagcactgtgcccagaacctgacggacctctccttggactga
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