Cebus imitator (Panamanian white-faced capuchin): 108307132
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Entry
108307132 CDS
T08783
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108307132 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cimi03041
]
108307132 (DDX46)
Enzymes [BR:
cimi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108307132 (DDX46)
Spliceosome [BR:
cimi03041
]
Complex A
U2 snRNP components
U2 related factors
108307132 (DDX46)
Complex B
108307132 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
108307132
NCBI-ProteinID:
XP_017387851
Ensembl:
ENSCCAG00000026721
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS
KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggagtcacgccactatcgaaaacgatcagcatcacggggacgctctggaagt
cggtctaggagtcgctcaccttcagacaaaagaagtaaacgtggagatgacagacggtct
agaagtagagatagagataggaggagagagaggtctcgtagcagggataaaagaagatct
cggtcaagggacaggaaacgtctgaggcgttccagaagtagagagagagagagaagccgg
gagcgaagaagatcccgaagtagagacaggagacgctcaaggagtagaagccggggccgg
cgatcccgatcctccagtcctggcaataaaagcaagaaaactgagaatagatctaggtcc
aaagagaaaaccgatggtggggaaagttctaaagagaagaaaaaagacaaagatgacaag
gaggatgaaaaagaaaaagatgctggcaactttgaccagaataagctggaagaagaaatg
agaaagcgaaaagaaagagtagaaaaatggcgcgaagagcaacgtaaaaaggctatggaa
aacataggagaactgaaaaaggaaattgaagagatgaaacaagggaaaaagtggagttta
gaggatgatgatgacgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa
aaatttaacatgagaagtgtaaaaggtggtgggggaaatgaaaagaagtctgggccaacg
gtcacaaaagttgtcactgttgtgacaaccaaaaaagcagttgtagattctgataagaag
aaaggtgagctgatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacagctctaacagggtatcaaacaaaacaacgaaagcttctagaacca
gtcgatcatggaaaaattgaatatgaaccatttaggaaaaacttctatgttgaagttcca
gaactagcaaaaatgtctcaagaagaggtaaatgtatttcgattggaaatggagggcatt
acagtcaaaggaaaaggttgcccaaagccaattaagtcttgggtacagtgtggaatttcc
atgaagatcttaaattccctcaaaaagcatggctatgaaaagcccacgcccatccaaacc
caagctattcctgctataatgtctggacgagatttgattggcattgccaaaacaggaagt
ggaaagaccattgcttttcttttgcccatgtttagacacatcatggatcagaggtcatta
gaagaaggagaagggccaatagctgtcatcatgactccaactcgagaactggctttacag
attactaaagagtgtaagaagttttccaagactttgggacttagagtggtctgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagagtgacatatgtcgttttagatgaagcagacagaatgtttgacatgggatttgag
ccccaggtcatgcgcattgtggataatgttcgtcctgatcgacagacagttatgttttca
gctactttccccagagctatggaggctttggctcgcagaatcctgagtaaacctattgaa
gtgcaggttggaggcaggagtgtggtttgctcagacgtggagcagcaagtgattgtgatt
gaagaagaaaagaaattcttgaagttacttgagcttctaggccattatcaagagtcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttctgaaggatttaatg
agagcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgactttaagaatgggacctgcaaacttcttgtggctacctctgttgctgcc
cgaggtctagatgtgaaacatctgattcttgtagtaaattatagctgccccaatcattat
gaggattatgtgcacagagcagggcggactggaagagcaggcaacaagggttatgcttat
acttttatcacagaagatcaagctcgctatgctggtgacataattaaagctcttgagttg
tcagggactgcagtgcctcctgatttagagaaactgtggagtgatttcaaagatcaacag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaatgagaggaagaagttacaaaaagcagctcttggt
ctgcaagattcagatgatgaggatgctgcagttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtaaaggatatggctgctcctggaacatcaagtgttcctgct
ccaactgcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat
gctcagaagaatttgggcatcgagtctcaggtagatgtgatgcaacaggccaccaatgca
attcttagaggtggcaccattctggctcccacggtgtctgcaaaaaccattgcagaacag
cttgctgaaaagatcaatgccaagctcaattatgtgcctttagagaaacaagaagaagag
agacaggatggtggacagaatgaatcttttaagagatatgaagaagaactagagatcaat
gacttcccacagactgctaggtggaaagttacctctaaggaagctctgcagagaatcagt
gaatactctgaggccgcaattacaatcagaggaacatacttccctcctggcaaagaaccc
aaggagggcgagcggaagatttacttggcaattgaaagtgccaatgaactggctgtgcaa
aaagcaaaggcagaaatcacccggctcataaaagaagaactgatccggctgcaaaattca
tatcagccaacaaataaaggaagatacaaagtcctataa
DBGET
integrated database retrieval system
