Ciona intestinalis (yellow sea squirt): 100175352
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Entry
100175352 CDS
T01056
Name
(RefSeq) LARGE xylosyl- and glucuronyltransferase 2-like
KO
K09668
glycosyltransferase-like protein LARGE [EC:2.4.2.- 2.4.1.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00515
Mannose type O-glycan biosynthesis
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
100175352
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100175352
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
100175352
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_49
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
100175352
NCBI-ProteinID:
XP_002128775
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All DBs
Position
3:750538..753554
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AA seq
682 aa
AA seq
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MRKNHKHKILISICIFVFIATICRFYFKSRSFNINYQNKEAIVERNKVRHAPRNTETAAY
IAKKDCTTVHICIVCAGYTASRQVVTLIKSLLFYRTSKLHVHFIVNGVSRTILRNLFQTW
DIPHFVVSFYQASDFIDEVSWIPNKHYSGVYGLMKLTILTVLPANVGKIIVLDTDLIFAH
DVTEIWQYFDKFGENEAIGLVENQSDWYLGTLWENYTPWPAIGRGFNTGLILLDCMKLRA
IEWQSKWKEVAQTDLKHFLSTALADQDIINSVLSHNASLLHVLPCYWNLQLSDHMRMDLC
YKQHKHEVKVIHWNTRRKQNNRHDENIKSLTDVFRTFTEINGAFLRHPRITCSTDDPEIY
QSLDDTDFDMCSDLISSAASLHRTHIFYLPFDYHSNSATDVSIIVHLTIDRLTVFEAMCK
HWEGPISAAFFTTDAEAQTLVDFVKLSPVLMDRTNIGYHIVYKNSNHAVYPINLLRNVAL
KQAVTDHVFLYDVDFVPMPGLFTYLTSYLAEHAKSPKTAYIVPAFESFWYKFKVPQTKSV
LHKQIDRGVFTSFRSYMWPQGHAATNFSRWKTAKEAYPVRWETNFEPYVVVKKQNLPLYD
QAFIGFGWNKISHIIELDAAGYQFVVLPFGFIIHIPHAPSVDLSKFRSSPSYRECLNIAK
EAFYEKLRSKYHKTTGMSKYFT
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaaaccacaagcataagatcttgataagtatttgtatatttgttttcattgct
accatatgtcggttttatttcaagagtcgttcattcaatattaattatcaaaacaaagaa
gcaattgttgaacgtaacaaagttcgccatgccccaagaaatactgaaacagctgcatac
atagcaaaaaaggactgtacaacggtacatatatgcattgtatgcgctggttacactgca
agcaggcaggttgtgactttgattaagtcactgctgttttaccgtaccagcaaattacat
gtgcacttcatagtgaatggagtgtctagaactattttacggaatttgtttcaaacatgg
gatattcctcattttgttgtttcattctatcaagcatctgattttatagatgaagtttcg
tggataccaaacaaacattattctggagtctatgggctaatgaagctcacaatactaact
gtcctgcctgcaaatgtgggtaaaattattgtgcttgacacagacctaatttttgcacat
gatgtcaccgaaatatggcagtactttgataaatttggtgaaaatgaggccattggtctt
gtggaaaaccagtctgactggtatcttggaacattatgggaaaactacacaccatggcca
gctattggtcgtgggtttaacactggattaatattgttggattgcatgaaacttagggca
atagaatggcaaagcaagtggaaagaggttgctcaaactgatttgaagcatttcttaagt
acagcacttgctgatcaagatattataaactccgttctgagccacaacgcaagccttctg
catgttcttccttgctattggaacctacaattgtccgaccatatgcgtatggatctatgc
tacaaacaacataaacatgaagttaaagtaattcactggaatacaagaagaaagcaaaat
aatcggcatgatgaaaatatcaagtctttaactgatgtttttcgtacatttacagaaata
aacggggcatttctacgccacccacgaatcacatgctcaactgatgatccggaaatttat
cagagcttggatgacactgatttcgatatgtgctcagatttaatttcatctgcagcaagt
ctgcatagaactcatatattttacctaccatttgactaccattctaattctgcaacagat
gtcagcattattgttcatcttacgattgacagacttacagtgtttgaagcaatgtgcaaa
cactgggaagggccaattagtgctgcattttttactacagatgcagaagcacaaactctt
gttgattttgtcaaactgtcacctgttcttatggatagaaccaacattggatatcacatt
gtgtacaagaactcaaaccatgctgtttacccaataaacttattacgtaacgttgcactt
aaacaagctgtcacagatcatgttttcctctacgatgttgattttgttcccatgccaggc
ttattcacctacctcacaagttatctggccgaacacgcaaagtcaccaaaaactgcatac
attgtgcctgcatttgaaagcttctggtacaagtttaaagtgccacagacaaaatctgtt
cttcataaacaaatagatcgaggggtttttacatcttttcgttcatatatgtggccgcaa
ggacatgctgctaccaacttctcccgatggaaaacagcaaaagaagcgtacccagttcgg
tgggagaccaattttgaaccatatgttgttgtaaaaaagcaaaacttgcccctatatgat
caagcttttattgggtttggttggaacaaaatctcgcatataattgagcttgatgctgca
ggttatcaatttgttgtcttgccatttggtttcattatccacatacctcatgctcccagt
gtagatttatcaaagttcagatcatccccaagctatcgggagtgcttgaacattgcaaaa
gaagctttttatgaaaagctacgttcaaaatatcacaaaaccactggtatgtctaaatat
tttacctaa
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