Ciona intestinalis (yellow sea squirt): 100177168
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Entry
100177168 CDS
T01056
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100177168
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100177168
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100177168
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100177168
Peptidases and inhibitors [BR:
cin01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100177168
Ubiquitin system [BR:
cin04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100177168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF3069
Motif
Other DBs
NCBI-GeneID:
100177168
NCBI-ProteinID:
XP_002128614
LinkDB
All DBs
Position
12:complement(862355..870467)
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AA seq
640 aa
AA seq
DB search
MVKKRVKQRRINNKQNGGNVKSGKIVEYEVDKDGGGEGDAKVCEDSNEPEVTLNLPPPIG
LHNLGNTCFFNSVLQSLSQTPVLSTVVKLHIKQTLDKIEQEVSTSSQPTLKYTLDKLGPM
TTAFSNFFDGIKVSNTMSTLNKRPTRTKSISPKNLFNQLCNKNAKFRGYQQQDSQEFFHC
LLESLKQEEIKQRKGGILHALGLYNSKAKDVSDDELKKVRGYGVQITEKTPTFVESVFGG
KLISCVQCDECKMVTKVTESFVDISLPVIEEQTSRGAMQRRKGVDKEEADQQNNSKTPLS
KHALKKMKKQRKQARRAKPTNQDISDVTIGIDDAVGTLANQVAEMVLSDAMMSLKLFHEE
DVLQVRGGSIDVASLNIPEEEEESPEDQSEEEDQLDETTSDKDSTEDEMLKPTRNQKVNS
LFDTPMKKVTPKKSRQIPDLLGHRFQPASEECSVQSCFHQFTKPEILTGSNKFGCEVCTN
KQKSTDGSKKTVYCNASKQMLIKKPPVILAVHLKRFQQAGFNLRKVNKKVEIPIVLDLSP
FSTVDCQVYADSESRLTYELYAIVEHSGSLSRGHYTAYVKLKPTNDNLIKFINKEDIMPD
KDTEPSKGVWYHTSDTNVSKTTQAKALNCNAYMLFYERII
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaaacgggtgaagcaacgcaggattaacaataagcagaatggagggaatgtt
aaaagtgggaagattgtggaatatgaagtagataaagatgggggtggtgagggagatgct
aaagtttgtgaagattcaaatgaacctgaagtaacactaaacctccccccacccattggt
ttacataaccttggcaacacttgtttctttaacagcgttttgcagtcactaagtcaaact
cctgtgctttcaaccgtcgtcaaacttcacataaaacaaactttggataaaattgaacaa
gaagtttccacttcttcccaaccgacgttaaaatatactttggataagttgggaccaatg
acaactgccttttcgaacttctttgatggaattaaagtttcaaacacgatgtcaactcta
aataaacgaccaacaagaacgaaatctatttcaccaaagaatctgttcaatcaactgtgt
aacaaaaatgcaaagttccggggttaccaacagcaagatagtcaggaattcttccattgt
ttgcttgaatcgctgaaacaagaagaaataaaacaaagaaaaggtggaatactacacgca
cttggtctttataattccaaagcaaaagatgtttctgatgatgagttaaagaaagtgcga
gggtacggggttcaaatcaccgagaaaacgccaacatttgttgaaagtgtgtttggtgga
aaacttattagttgcgttcaatgtgatgaatgtaaaatggtaaccaaggtaacggaatcg
tttgttgatatttctcttcctgtaattgaggaacaaacatcacgaggagcgatgcagagg
aggaagggggttgataaagaggaggcagatcaacagaataattcgaagactccattaagc
aaacacgctttaaaaaaaatgaaaaaacaaagaaaacaagctcgtcgtgcaaaaccaacc
aaccaggacattagtgatgtcacaatagggattgatgatgctgtcggtacattagccaat
caggtggcagagatggtgttgtctgatgccatgatgtcactcaagttgtttcatgaggag
gatgtgttacaggtccgtggaggatccatagatgtggcatctcttaatatccctgaggag
gaagaagaaagtccggaggatcaaagtgaagaagaagatcaattggatgaaactacatcc
gataaagattcaactgaagatgaaatgttgaaaccaacaaggaatcaaaaagtaaactca
ctcttcgataccccaatgaagaaagttactccgaagaaaagtcgacaaatccctgattta
ctcggacatcggtttcaacctgctagtgaggaatgctccgtacaatcttgtttccaccaa
ttcactaaaccagaaattttgaccgggtcaaataagtttggttgtgaagtttgtacgaac
aaacaaaagtcaacggatggaagcaagaagaccgtttactgcaacgcaagcaaacaaatg
ttaatcaaaaaaccaccagtaatacttgctgttcatttgaaaagatttcaacaggcaggc
ttcaaccttcgcaaagtgaacaaaaaagttgaaattccaatcgtccttgatctgtcacct
ttctctactgttgattgccaggtgtatgctgacagtgaatcacgtctcacgtacgaactt
tatgcgattgttgaacacagtgggagtttaagccgaggtcattacactgcgtatgttaaa
cttaaaccaaccaacgataatttaatcaaatttatcaacaaagaagatataatgccagac
aaagatacagaaccttcaaaaggcgtatggtaccacaccagcgatactaatgtttctaaa
actacccaagcaaaagcattgaactgtaacgcatatatgttattctatgagagaatcatt
taa
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