Ciona intestinalis (yellow sea squirt): 100177256
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Entry
100177256 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100177256
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00511
Other glycan degradation
cin00513
Various types of N-glycan biosynthesis
cin00520
Amino sugar and nucleotide sugar metabolism
cin00531
Glycosaminoglycan degradation
cin00600
Sphingolipid metabolism
cin00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cin00604
Glycosphingolipid biosynthesis - ganglio series
cin01100
Metabolic pathways
cin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
100177256
09103 Lipid metabolism
00600 Sphingolipid metabolism
100177256
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
100177256
00531 Glycosaminoglycan degradation
100177256
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
100177256
00604 Glycosphingolipid biosynthesis - ganglio series
100177256
00511 Other glycan degradation
100177256
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100177256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cin03110
]
100177256
Enzymes [BR:
cin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
100177256
Chaperones and folding catalysts [BR:
cin03110
]
Intramolecular chaperones
Others
100177256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
Glyco_hydro_20b
CHB_HEX_C
Motif
Other DBs
NCBI-GeneID:
100177256
NCBI-ProteinID:
XP_009858403
Ensembl:
ENSCING00000005422
LinkDB
All DBs
Position
4:386787..396037
Genome browser
AA seq
912 aa
AA seq
DB search
MKQGTKMWHLLCAIICLLHAPQLSECLAQSDLNYIGENLNVQFNVINNLNGNNENFNAEV
LLHNTGPSVINKDSWEIFFYSLYMIEPDHLPNIAGYEIPQTGLTFYHVNGILFKFSPTAN
FKSLQPGATLTVSLVIQYWSVSRTDHMPRWYVASQGFLPVMLKSTESDSEFVGSFDTKDK
YKRYADDRYHPFSGEDRYARFSSMNHEATPKPIIPTPTEITVENADTLVDNTWKINCLEP
FYQKECQLLSDFFKINIQDTVITEKVITVRNQNVAVDEALYTEEAYALTIGSGLIIIEAP
DSSGIFYASQSLKSLTKKNGDSFTIKQASIKDAPRFQYRGMHIDVARNFVQKSDLLNLIK
VMGMYKLNNLHLHLTDDEGWRIQMEWCPELTSIGARRVHDVNETEGIIPQLGSGPFNDTS
GSGFYSKNEYIEILMEAEKNHIRVIPEIDLPGHAHAAIKSNLQYYKRLLSEGENQEVAED
SLISDLQDKSKYLSVQMFTDNTVNPCIPGTYTFIRKVVKELVDLHNGVQNLTVFHLGGDE
VVDAWTESEKCRQFLNVTTSFPSSVSDLMEYFIKVASYSVLNATSNNLKLGFWEDGVLGE
GDEPYTKPDISDDDVIAYAWQNIWEWGVANRAYKLANAGYKVVLSQATHLYFDMPNEPDP
EERGLYWASRFTDSFKTFGFMPDSVYDNVDVKRSGESYTKSELCQTDGACTPLDKPENIL
GMQGQLFSETVRTKQDLEYMIYPRIIALAERAWHKGAWEATSGAGGNMDLRDKDWSEFAA
AVGTKELNRLHDLGIEYRIPLPGIKQMISANETGPTITCEFPGLEIAYREVGADQWRTSV
CWSILPLAVNKDYEFKTVSFGRESRTMKATIQMINPPTPQTTTSGYQRVLGLSRLYCIWF
SFLSYSLTINMI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaggaaccaaaatgtggcatctgttgtgtgcgatcatatgcttgttacatgca
ccacaactttcagaatgtttggctcaatcggatttgaactacatcggggaaaatttgaat
gtgcagtttaacgtgatcaataatttaaatggaaataatgaaaacttcaacgctgaagta
cttttgcataacactggaccttcagttataaataaggattcatgggaaatattcttctat
agtttgtacatgatagaaccagatcacttaccaaatattgcgggttacgaaatccctcaa
acaggactcacgttttatcacgtgaatggaattctgtttaaatttagccctaccgctaat
tttaaaagtcttcagcctggcgctactttaactgtcagtctggtgattcaatattggagc
gtatctagaactgatcacatgccccgctggtatgttgcttctcaaggttttttaccagtg
atgttaaaatcaacggaaagtgattcggagttcgttggtagctttgatacaaaagataaa
tacaagagatatgctgatgacagataccacccattttccggagaagatagatacgcaaga
tttagctccatgaaccacgaagcaacaccaaagccaattataccaacacccaccgaaatt
acggtggaaaacgcagatacgttggtcgataacacttggaaaataaattgtcttgaacca
ttctatcaaaaagaatgtcaacttttatcggatttctttaagatcaatatacaagataca
gtaataactgaaaaggtcataacagtacgaaatcaaaatgttgcagtcgacgaagctttg
tacaccgaagaagcgtatgcactgacaataggaagtggtttaattatcattgaagctcca
gattcaagcggaatattttatgcaagtcaatcgttaaaatcattaacaaagaaaaatgga
gactcattcacaataaaacaagcctcaattaaggatgcccctaggttccaataccgtggt
atgcatattgatgtggcaagaaacttcgtccaaaaatcggacctattaaatttgattaaa
gttatgggaatgtataagctgaataacttacatttacatctgactgacgatgaaggatgg
cgaattcaaatggagtggtgcccggaacttacgtcgataggtgctagaagagtgcacgat
gtaaatgaaacagaggggattattccacaattagggtccgggcctttcaacgacacaagt
ggaagtgggttttattcgaaaaatgaatacatagaaatcttaatggaagcagaaaagaat
catataagggtgattcctgagatagatctaccaggccacgcgcatgcagcgattaaatcg
aatttacaatactacaaacggttgctaagcgaaggtgaaaatcaagaggtagcggaagat
tccttaatttcggacttacaagacaaatctaaatatttatctgttcaaatgtttactgac
aacacggttaacccttgcataccaggaacttacacgtttataaggaaagttgttaaagaa
cttgtagatcttcataatggagttcagaatttgaccgtgttccacttgggtggcgacgaa
gtggttgatgcgtggacagaatcagagaaatgtcgacaatttttaaatgttactactagt
tttccgtcaagtgttagtgacctgatggagtatttcataaaagtggcgagctactctgtt
ttgaatgcgacaagtaataatctgaagttggggttttgggaagatggtgtacttggggaa
ggcgatgaaccatatactaaaccagatatatctgatgatgatgttatagcgtacgcgtgg
caaaacatatgggaatggggtgttgctaaccgagcgtataagctcgccaatgccggatat
aaggtggttctttctcaagcaactcatttgtattttgacatgccaaatgaacctgatccg
gaagaacgaggactttactgggcatcaagatttactgacagtttcaaaacgttcggattc
atgccagattctgtttacgacaatgttgatgtaaaacgtagtggagaatcatacacaaag
tcagagctttgtcaaacagatggcgcgtgtacgcctttagataagccagaaaacatactg
ggaatgcaaggacaactgttctccgagactgtcaggacgaaacaagatttggaatatatg
atatatcctagaataatagctttagctgaacgtgcctggcataagggtgcttgggaagct
acatctggtgcgggtggcaacatggacttacgcgataaagattggtccgaatttgctgca
gcagtaggaacaaaggaattaaatagactgcatgaccttggtatcgaataccgaattcca
ttaccaggaatcaaacaaatgattagtgcaaacgaaactggtccaaccattacatgtgag
tttcctgggttagaaattgcttatcgagaagttggtgctgaccaatggagaacatctgtg
tgttggagcatacttccacttgcagtcaacaaagattatgaatttaaaactgtttcattt
ggaagggagagtcgcaccatgaaagccacgatacaaatgataaacccaccaaccccgcag
acaactactagtggttatcaacgtgtgcttggtttgtctcgcctgtactgcatctggttt
tcatttctgtcttactctctcaccattaacatgatttaa
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