Ciona intestinalis (yellow sea squirt): 100177606
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Entry
100177606 CDS
T01056
Name
(RefSeq) protein virilizer homolog
KO
K22910
protein virilizer
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100177606
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
100177606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIR_N
Motif
Other DBs
NCBI-GeneID:
100177606
NCBI-ProteinID:
XP_018667114
LinkDB
All DBs
Position
4:complement(3143703..3152680)
Genome browser
AA seq
2047 aa
AA seq
DB search
MKLLFCDTFSQEPPDGSVTNSWAIIDFPCAVVLEEIRIIPRGSRLSDQLCLDGQRGNTNP
AHFRIDFFACDIKNENASTFENLCALDYQENSKTSVFPRLPFLTNKLLCCGWYTSVTIAV
FGAEGSDASAVKAIHDRRENLSRVSSRPPPNVPPPTHGVEFQTVDDLRAPYQGRDSRDFM
RNPPLLPLPGMLPQPNTVGELNQPGYPNFGQDTSDRLPISTHNFPNPPFRDRGGDNFMFR
GESIGDKMYRNQVSLLQGGGNNPPVHQRGFPHVDQRNYRYQPGNSRYMDQDHGYDRIPQK
FPPTNRGPHNEQREADTMVEDETKYDDEVNANQMQNDEEWMGAEYEEISDDEMDEEANLR
DMEAMMTADMLLPPSMMTFNPFDMEVFPLSYFRSPDVTDYEALHSKLNQQNYDDEIEQTN
TMHSKSCQNLKKMVESTLKICPVTFKENGVPVTELCEEKEQQWVNNLEKITLNVTSELPY
LDASADGEIDYYLVLAVWAVHALDLDGPLAKLIALNVRAIKVGLGLVKMLCGTCAEAVDQ
LDKLDVVSHLLSILLEQHVASSVKVQALHALDAATNWPAMLHSFLFKPIYVHTNNDEVTS
KHQAGYAWVIEIALQPQAARVAAGLTQLTKKAHLYECMHQVQVVTQSFVMEQIPDEYAYV
SEDEEDYNNEEEVQGVEMVVMSSASADEEEEDEEEENREEVLPNQMLNEHTKVDLSLRIV
HEKGERKVIGLSRNSESCDSQSPLADADENDQHGEIHEEVVKESNLMPVESVINMNDVTV
KEEELMEIAGCLNEITSCFQSPQKMIGQLPILMFPLSRRQRPSTKQDDNKISEQTVYRLA
EGTNLLSSIQALVSLPIVSGHKVLFDACGRFLELLMSSQSGLLYLASNSDSALHIIQHLM
RSSPMLDVEAQDSPCRLGAKLAFHLQTIQSLDLVSGLLESDADEEDLEEELVHAFKTLYS
ITYIPLGKQCVSQVLSKEDNIKSLLTCLTFPHKLEDEKEVKEVEIEKENKKEEKPEKSEK
SEVSSEKEPSVETEDEKKSDVFHHRSAVNNYAGALLLLTLQRSEDMTYIYKHLQLLLKPC
FSKQQLISHSEDLQNWLTPLQKQLVGDASDIEKLTQFIKTTTPLLEWLTLPDSGPELCMA
LRLLCHVCFTDSNEDLKDDAESRVRVMRLFATDSLNIILSFIEQLHKTLQFACHGHRAMA
SGMQQLTHCMVASMAQKSYSLLHQMLSQLLGASIDTKTVNGERIALTVISLYSDLYLLLY
PLDSILLDQMTEQAISILSLFFSPSSCSDQSHTVLKQITTFAENQCDNFLPTLTLLSHLL
PLPLPIISPQEPPDHAQASVVATCRLWSSIIPSHLDEIMSLLLPLSSSTCRSLVELTIII
IQQLVDLSPTLAHSLVKKYAEEMAPLSVSAVLAEQEGNELPAEETGEKEMLLSPEQITVI
QTFAEIISLPAAKSAFLCASRSEPQGVLDLWQHASCDDSPTDAVAAILLLAYVLVDQDTT
LLPLDGSTENYANALPSTDQITAIANLALRQLSNASPRVYNRALLVLCNLTGSSVGIPIA
LKCIVDKPNHMRNGLKRVSDGFNVTQSSSVDAAFHMLQLIQQLLTADTDNPGLLTIGEFK
ALLTDDDSVDIAPFLALEKQLSELACNDRDYPDHFAQALDQLSVLRQSIAAADVSTSDPK
IPEAVSLPEPLPLHEQFANRPIFAFGQHDPLLYVRQSLTAPQNNRLHSDIDDYRVVECDL
IATADKFCPGYDLAEQVNKLAKSSGLQDDVEESEAAAAARAKRRQKVETFSARFGKTMTF
IKRSHGLLVSHQRTGRGRGRGNPSNRPYDLFRHRKQNTSRPPSMHVDDFLAADEEQQKFD
DNSFFKPPAPMPSTSTARRNSQPSSFKREFTPRGRGGRGGSSRNGSSSAPRGGFSRFAST
GSVQNKFKPKSVSTSSSGNGRVNRIPDRFRGPNTTTRITSRLSFSPREGYKTNKTQPPPW
ESSRNFSATNSFRNRGLKVPHRIPRTSSFTQFHSPGVKQWGVGSSLRRGRGYAKPRGRGK
HSRSITH
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttctattttgtgatacattctcacaagagccccctgatggaagtgttacaaac
agctgggccatcattgacttcccatgtgctgtagtgctcgaagaaatacgaatcatacca
agaggttctaggctaagtgaccaactctgtcttgatggacaacgcggcaacaccaacccc
gctcattttcgaattgacttctttgcctgtgatataaagaatgaaaatgcgagcaccttt
gaaaacctgtgtgcgcttgattaccaagaaaactcaaaaacaagcgttttcccacgccta
ccctttcttaccaacaagctgctctgctgtggctggtacacctctgtaaccatcgctgtt
ttcggagcagaaggctcagatgcttctgctgtgaaagcaatccatgaccgccgtgagaat
ttaagtcgtgtctcatcacgccccccacccaacgtacccccaccaactcacggggttgag
ttccagacagtagacgaccttcgtgctccataccaaggcagagattcgagagatttcatg
agaaatccaccccttctgcctctccctggcatgctgccgcagcctaatacagtcggcgaa
ctaaaccaaccaggatatccaaactttggtcaagacacaagcgataggttacctatttca
acccacaacttcccgaaccccccttttagagaccggggtggagataactttatgttccgt
ggtgaatcaattggtgataaaatgtacagaaaccaggtctcacttctgcagggtggtggc
aacaatccaccagttcaccagcgaggttttcctcatgttgaccagcgcaactatcggtac
cagcccggtaactcacggtacatggaccaggatcatggctatgatcgaataccccagaag
tttccacccacaaacagggggccacacaatgagcaaagagaagcagatacaatggtggaa
gatgaaacaaaatatgatgatgaagtgaatgcaaatcaaatgcagaatgatgaagagtgg
atgggagcagaatatgaagagatcagcgatgatgaaatggatgaggaggcaaatcttcgt
gatatggaagcgatgatgacggcagatatgctccttcctccatccatgatgacttttaat
ccattcgacatggaagtcttccctctctcatactttaggtcaccagatgtgacagattat
gaagctcttcatagtaaattaaaccaacaaaattacgacgatgaaatagaacaaacgaat
acaatgcattcaaagtcatgtcaaaacctgaaaaaaatggttgaatccaccttaaaaatc
tgcccggtaacttttaaagaaaatggggtgcctgtaactgaactatgtgaagagaaagaa
cagcaatgggttaataacctggaaaaaattactctgaatgttacatctgaattgccttac
ctggatgcatcagcagatggagaaatagattattatttagtccttgcagtttgggcagta
catgcactggatttagacgggccgctcgcaaagttgattgcactcaatgtgcgagccata
aaagttggtttagggttggtgaaaatgctttgtgggacttgtgcagaggctgtggatcaa
ctggacaaactagatgttgtcagtcacctcctttctattctgctggagcaacatgtcgct
tcttctgttaaagtacaagctcttcatgcactggatgctgctaccaactggccagctatg
ttgcatagcttcctatttaaaccaatatatgtccacaccaacaatgatgaggtaacatcg
aaacaccaagctggatatgcatgggttatagagattgctttacaacctcaagctgccagg
gttgctgctggtttgacacagttgacaaagaaagctcatctttatgaatgcatgcaccaa
gttcaagttgtgactcagtcgtttgtgatggagcaaatcccagatgagtacgcgtacgtg
tcagaggatgaggaggattacaataatgaggaggaggtgcaaggagtagagatggtcgtc
atgtcatccgcatccgctgatgaagaggaagaagatgaagaagaggaaaacagagaggaa
gttttgccaaaccaaatgctcaacgaacacactaaagttgatttaagtcttcgtattgtc
cacgagaaaggcgagcgtaaagttatcgggttatctcgaaactcggaaagttgtgattct
caatctcctcttgccgatgcggatgagaacgatcaacacggtgaaattcatgaagaagtt
gtcaaggaaagcaatctgatgccagttgaatcagtcatcaacatgaatgatgtcactgtg
aaggaagaagagttgatggagattgctggatgtttaaatgagatcacttcttgcttccaa
tctccccagaaaatgatcggccaacttccgattcttatgtttcctctttcaagaagacag
agaccatcaacaaaacaggatgataacaagatatcagaacaaactgtatacagactggct
gaaggaacaaatcttctttcttccatccaagcattggtgagtttacccatcgtgtccgga
cacaaagttttattcgatgcttgcggaagattcctcgagcttctcatgtcctcccagtcc
ggtcttctctaccttgcatccaactctgattcagctcttcacatcatccagcacttgatg
cgatcctctccgatgctcgatgtcgaggctcaggactctccgtgtcgtctcggagcaaag
ttagcctttcacctccaaacaattcaatccctggatcttgtctccggactcttagagtcg
gatgcagatgaggaggatttggaggaagagctcgttcatgcgttcaagactctttactca
atcacttacatcccacttggaaagcaatgtgtgagccaggtcctctcaaaagaagacaac
attaagtccctcctcacctgccttacttttccccacaaacttgaggatgaaaaagaagtg
aaagaagttgaaattgaaaaagaaaacaaaaaggaagaaaaacctgaaaaatctgaaaaa
tctgaagtttcttcagaaaaagagccgtctgtggaaacagaagatgaaaagaaatccgac
gttttccatcatcgctctgcagtgaacaactatgcgggtgcattgctgctgctgacacta
caaagatcagaagacatgacttacatctacaaacatctccaattacttctaaagccatgc
ttctccaagcagcaactaatttcccattcagaagacctacagaactggctgacaccactt
caaaagcagcttgttggtgatgctagtgatatagagaagctgacgcagttcattaagacg
acaactcctttgcttgaatggttgactcttccagatagtggtccagaactctgtatggca
cttcggttgttgtgtcatgtatgttttacagatagtaatgaggacttaaaagatgatgca
gagtcgagagttcgggtgatgcggctcttcgctaccgacagtctcaacatcatcctctca
ttcattgagcaactccacaaaaccttacaatttgcgtgccacggccaccgagccatggct
tccggcatgcagcagctaactcactgcatggttgcctccatggcacagaaaagctactca
ctcctacatcaaatgctctcacaacttctcggggcgagcatcgacaccaaaactgtaaac
ggggaacgaatcgctctcactgtaatctcgctctactctgacctatacctcctactctac
ccattagattccattctcttggaccaaatgacggagcaagccatctcaattctttctctt
ttcttctccccctcctcctgcagcgaccaatcacatacagtgctcaaacagataacgaca
ttcgcggaaaaccagtgcgacaactttctcccaactcttacattgctatcccatcttcta
cccctaccactgcctataatatccccacaagagccaccagaccacgcccaagcttctgtg
gttgccacttgccgtctatggagctccatcataccatcccatcttgatgaaataatgtcc
ttgcttctaccattatcgtcctccacctgcagatcattagtcgaactgacgatcataata
atccaacaactagtcgacctatcccccaccctagcccactctctagttaaaaaatacgcg
gaagaaatggcgcctctctccgtgagcgcggtgctcgcggagcaagagggaaacgaactc
ccagctgaggaaacgggcgaaaaagagatgttactctctcccgagcagatcacggtcatc
caaacctttgctgagatcatttctctcccagctgctaaatcagctttcctctgtgcaagc
cgaagcgaaccgcaaggtgtattggacctctggcagcacgcttcatgcgatgactcgccg
accgatgcagttgctgctatattacttttagcctacgtgcttgttgaccaggacacaact
cttctaccgctagatggtagcacagagaactacgcgaacgctttgccttccaccgaccag
attactgcaattgcaaatttagctctgcgtcaactttccaacgcatctccccgggtatac
aatcgtgctctcctagttctctgcaatttaactgggtctagtgttggaatcccgattgct
ttgaaatgcattgtagataaaccaaatcacatgaggaacggactcaagcgagttagtgat
ggatttaacgttacacagtcctcaagtgtagacgcagcattccatatgttacagttaata
caacagctcttaacagcggatacggacaaccctggcttgctgactatcggcgaatttaaa
gccttgttgactgacgatgattcggtggacattgcaccgttcttagcgctcgaaaaacaa
ctttcggagttagcatgcaacgaccgtgactaccctgatcatttcgcacaagcactcgat
cagttatctgtattaagacaaagcatcgctgctgccgacgtctcaacttcggatccgaaa
attcccgaagcagtttcgcttcccgaacctctaccgctacatgagcagtttgccaaccgc
ccgatatttgcttttggccagcacgacccacttctctacgttcgacaatcgcttactgca
ccacagaataaccgacttcattctgacatagatgattaccgtgttgtagaatgcgacttg
attgccacagctgataaattctgccccggctacgatcttgccgagcaagtaaacaaactc
gcaaaatccagcggcctccaggacgacgttgaagagtcagaagcggcggcagcagcgcgc
gcaaagcgtcgccaaaaagtcgaaaccttttccgctcgcttcggcaagacaatgaccttc
attaaacgatcccacggtctcctagtttcccaccaacgcacaggcagaggcagagggcgt
ggcaacccaagcaatcgaccatacgaccttttccgtcaccgaaaacagaacacaagtcgc
cctccatccatgcacgtggacgactttcttgccgcggacgaagaacagcaaaaattcgac
gataactcgttcttcaaaccacccgccccgatgccttcgacttctacagcccgcagaaac
agccagccgtcgtcctttaaacgggaattcacacctcgtggccgaggtggcagaggcggg
tcctccagaaacggttcgtccagcgcacccagaggcggcttctctcgttttgcgagcaca
ggctccgtacagaacaagttcaaaccaaaatccgtaagcacatcaagcagtggtaacggt
cgtgtgaaccgaatccccgaccgcttccggggccctaacaccacgacccgcatcaccagt
cgtctcagcttttctccaagagaaggttacaagacgaacaaaactcaaccaccaccgtgg
gaatcgtcacgcaacttttcggcgaccaattccttcagaaacaggggcttaaaagttcct
cacagaatcccccgcacttcgtcattcacccagttccattctcctggggtgaaacagtgg
ggtgtggggtcttctttgcggcggggtagagggtacgcgaaaccccgcggaagaggcaag
cattcccgatccatcactcattaa
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integrated database retrieval system
