Ciona intestinalis (yellow sea squirt): 100182089
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Entry
100182089 CDS
T01056
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100182089
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100182089
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100182089
Peptidases and inhibitors [BR:
cin01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100182089
Ubiquitin system [BR:
cin04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100182089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
DUSP
Fin
Motif
Other DBs
NCBI-GeneID:
100182089
NCBI-ProteinID:
XP_002121467
LinkDB
All DBs
Position
4:1508263..1512172
Genome browser
AA seq
1077 aa
AA seq
DB search
MGRKSANKSNEPLVWQWVDDADPSKIGDKEVRTAYRLNLPKCTSCRKNCQAKPTCLFGLG
EAQWLSSPSHLEWENIEQKLEKQIEAEKRKEGELVGLKNLGATCYVNTYLQLWYHNVSFR
NALYNLEYKDEDLALQQTLCGQLQLIFGLLESSISKSVDPSHFIKCLGLATDLQQDAQEF
SKLFLSLLENTPSLSQVIKEQFCGQYTYVTVCKSCQSVTERPSNFYELDLNVQGHKDLKS
CILEFLREEKLVGENQYYCTKCQSKQDALRKIALKKLPETLNLQLLRFVYDRSSQRRQKI
VTSLTFPDHLDLSSMVDKNVTTLSQSDTQYKLTAVLIHRGLSASSGHFVAHILEPESGNW
YKFNDEVVAKMKSGKKLDLDSYKGEDTVCTELLQEPAPKKMKLLKGNHSSKDVYMLVYTK
VSDKNLAMVPVPATVQQLVDEHNAVKATRLKGIRKEAEEKQLKDVELRKHMIRFIHLLHS
EENFGHRLLPTKVLKQFMNSAKSDAVFKPEVNYLCQHGNLKVDKAVTLKYIPKSAADIIQ
STYPLFKPIPDSMLCHACVKNHCLLIQAKKRLKKDNLFVSESLKTLQNGSTEMDTDLFYV
GKQSLKRWRSLAMQEVLKKYASTSNNNIMADSTDSKSNATGNNESSDESDETFNSDLLCN
HNHLTIEKSAFQLVPHYLWEILHHYFPDCVEFKYASADPCTTCQSDVLFHEKELTTRKEI
AAIQKANLHQLFLNKNRPSLAFLYDVEFSKQQANQTEFFIVPSQFVDHWKDFVRHPDKNE
PVVSVINKNFLCPHNMLLYDPALNLKSTESTVSNCEQQCEVLWCSEWRYIKENFSVDHEI
QISKTFPSECFVVLQNMDHTNLNGNASTNGTEIVDLTGSDQSPSVIIKSDAENQSAKTNV
ENKCNIPKPVARLVYSPGLCATCMKGLEQKRFEEMCKYDDGEIYVLKSTQPSQEFCSLST
KNIETLPKETRRGKRVRRCVRGEKKLSNLSSNLTLKELKIRIMNQFSIPPFDQNLWLNGR
KLTHDDWTLESLKIIPGCTLNLVEDIPAPDSALIVYESVKTTEPETGFQGTGLLGYH
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaagagtgcaaacaaatccaatgagcctcttgtatggcagtgggtggatgat
gctgatccttcaaaaattggtgacaaggaagtaagaacggcttacaggctcaatctacca
aaatgcacatcatgtagaaaaaactgccaggccaaacctacttgtctgtttggattgggg
gaagctcaatggctgagctctccttctcaccttgagtgggaaaacatagaacagaaattg
gagaaacagattgaagcagaaaaaaggaaagaaggggagctggttggtctaaaaaatctg
ggagctacttgttatgttaatacctatctgcagttgtggtatcataatgtctcatttcgg
aatgctctttataacttggaatacaaagatgaggaccttgctctgcagcaaacattgtgt
ggccaattacagcttatattcggtttattagaaagcagcatttcaaaatccgtagacccg
tctcattttattaagtgtcttggtttggccactgatttgcaacaggacgcacaggagttt
tcaaaattgttccttagtttactggaaaacacaccttccctgtctcaagtcattaaggag
cagttttgtgggcagtacacatatgttactgtttgtaagtcctgtcagtctgttactgaa
cgaccgtctaatttttatgaacttgatttgaacgttcagggacacaaggatttgaaaagt
tgtattttggagtttctgcgtgaggagaaactagtgggtgagaatcagtactactgcact
aaatgtcaaagcaaacaagatgctttgaggaaaatcgcattaaaaaagctacctgaaact
ttaaatctgcagttgttgcgttttgtgtatgataggtcgagccaaaggcgtcagaaaatt
gtgacaagtttaacatttcctgatcatctggatttgtcatccatggttgataagaatgta
acaacgctatctcagagtgatacacagtacaagttgactgctgttcttatacatcgaggc
ttgagtgcatcttcaggtcacttcgtagctcatattttggaacctgaaagtgggaactgg
tacaagttcaatgatgaggtcgtagccaaaatgaaaagtgggaaaaagcttgacttagac
agttacaaaggagaggatactgtttgtacagaactactgcaagaacctgctccgaaaaag
atgaaattattaaaaggaaatcattcttcaaaagatgtctacatgttggtttataccaag
gtgtctgacaaaaacctggcaatggttccagttcctgctacagttcagcagcttgtggat
gagcacaatgcagtgaaagcaactcgtttaaaaggaattcgtaaggaagccgaagaaaaa
caactgaaggatgtagaactaagaaagcatatgattcgttttattcatcttttacattcg
gaagaaaactttggacaccgtttgttgccgacaaaagtcctgaaacagtttatgaattcg
gccaagtcggatgctgtttttaaaccagaggtgaattacttatgtcaacatggaaatctt
aaagtggacaaagctgtaacgctcaagtacataccaaaaagtgctgcagatatcattcaa
agcacttacccattattcaagcctatacccgattcaatgctttgtcatgcttgtgttaaa
aaccactgtttgctcatacaggcaaagaaaaggctaaaaaaagacaatttgtttgtttcc
gaatcacttaaaacgttacagaatggaagtacagaaatggatacagatttgttttatgtg
ggcaaacagtctctcaaaaggtggcgctctttagcaatgcaggaggttctaaaaaaatat
gcttcaacctcaaataataatatcatggcagactcaactgacagtaaaagcaatgcaact
ggaaacaatgagagctcagatgaatctgatgagacctttaactctgacctgttatgcaat
cataatcatttaaccattgaaaagtctgcatttcaacttgtgcctcattacctttgggaa
atactacatcattacttccctgattgtgttgagttcaagtatgcaagtgcagatccctgt
accacttgtcaatcagatgtcttatttcatgaaaaggaattaaccacacggaaagaaatt
gcagcgattcagaaagccaatctacatcaattatttttaaacaaaaaccgtccatcactt
gcgtttttatacgatgttgagttttcaaagcagcaggcaaatcaaacagagttctttatt
gttccttctcagtttgtggatcattggaaggattttgttcgccatcctgataagaatgag
cctgttgtttcagttattaataaaaatttcctctgtccacataacatgcttctttatgat
ccagcattgaatcttaaatctacagaaagcactgtgagtaactgtgaacaacagtgcgag
gtgctatggtgttcagaatggcgatacatcaaggaaaattttagtgttgatcatgagata
caaatcagcaaaactttcccatcggagtgttttgtggtacttcaaaacatggatcatacc
aatttaaatggaaatgcttcaacaaatggaactgaaattgttgacttaactggcagtgat
cagtccccttcggttattattaaatcagatgcagaaaatcaatctgcaaaaacaaatgtt
gaaaataaatgcaatataccaaaaccagtagcgcgattggtatattcaccagggctgtgt
gcaacctgcatgaaagggttggaacaaaaaagatttgaagaaatgtgcaagtatgacgat
ggtgagatctatgtattaaaatctactcaaccctcccaagaattttgcagtttatcaacg
aaaaacattgaaactttgcccaaggaaacaaggcgtggaaaaagggttcgaagatgcgta
cgaggggaaaaaaaattaagtaacctgtcctccaatctaactttaaaagaactgaaaatt
cgaataatgaatcaattctcaattcctccatttgaccagaacctttggctcaatggtcgg
aaattaactcacgatgactggactttggaaagtctaaagattataccaggttgtactttg
aaccttgtggaggacatacccgcaccagacagtgcactgattgtttatgaatcagttaaa
acaacagaacctgaaactggctttcaaggcactggactacttggttatcactag
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