Ciona intestinalis (yellow sea squirt): 100182256
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Entry
100182256 CDS
T01056
Name
(RefSeq) multidrug resistance protein 1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100182256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100182256
04147 Exosome [BR:
cin04147
]
100182256
04090 CD molecules [BR:
cin04090
]
100182256
Enzymes [BR:
cin01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100182256
Transporters [BR:
cin02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100182256
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100182256
CD molecules [BR:
cin04090
]
Proteins
100182256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_16
AAA_30
AAA_29
Rad17
AAA_5
AAA_7
AAA_21
DUF815
AAA_24
G-alpha
AAA_25
NB-ARC
AAA_19
DNA_pol3_beta
DEAD
Sterol-sensing
NTPase_1
Motif
Other DBs
NCBI-GeneID:
100182256
NCBI-ProteinID:
XP_002131382
Ensembl:
ENSCING00000009134
LinkDB
All DBs
Position
2:complement(5701935..5717477)
Genome browser
AA seq
1347 aa
AA seq
DB search
MPPDVDGSETIKPVEENVVETSFSRTKDGSTMGSDNGSDGKKEKKEKEDVPTVPYYKLLR
FATGIDYLLMTIGTLAAVIHGAGLPVMFIFFGQLTTEFTTYGRYLQCQLQYNICYAMNLT
TLNESEWDTTVAPTLNGFKDESLKYVYYFVYIACAVLFFATIQVGCWSLASVRQTKRIRV
AYFRAILRQDMGFHDVTSSGELNVRLSADVKKIKDGIDEKVSLTTQYLSMGLSGLIIGIV
YAWKLALVSLAVSPLLGVSSTLMFTLTGIYTKKELAAYAKAGSIAEEAISAVRTVVSFGC
QQKEVERYAGNLGSAKIVGIKRGFVSGFSIGLLYMSMFGLYGLSFWYGTTLVLSGEITVG
NMMTTFFNILIAAFALGTAGSYFESFAGAKAAGASIFSVIDRIPTIDIFSDKGENPNPED
GSVQLKDVKFTYPSRPDTQVLKGVSLSIEHGKTVALVGQSGCGKSTIIQLVQRFYDVQEG
SVTVGGKNVTDVNVRKLRELIGVVAQEPVLFATTIAENIRWGREGVTDREIEQAARQANA
YNFIMKLPNKFETLVGERGGQMSGGQKQRIAIARAIVRNPKVLLLDEATSALDTKSESIV
QQALEKASAGRTTVVVAHRLSTIRSADKIFAFHEGLLKEEGSHEELLKIKDGVYSNLINM
QAGREKEEENEKLPDPDELIETDIPEVQFSSDAQQRRRSRTMSGSSVSSLMNRRGSMTLA
KTYSQRSNSKQVNGIGHEVESKDDEEEEDIPDVGFGRILKLNQPEWYYMAGGCVFAAIAG
AADPVNAILFAEVLTIFTLTDVEEQKAKAVLYALIFVGVGVVTFIAYCCEATLFAKSGME
LTVRLRMMAFQAMMRQDIAYFDDHKHSTGALCTRLSTDASRVQGCTGVRIGTVIKNFSSL
GVALGIAFAYGWKLTLLTMAFIPFLILGGLLEMQLLIGKEEKEKQAYEGAGQVAGEAINN
IRTVASLTKEKTIYELYTEQLVGPVKKATQKVLLVGLGYGYSQCVLYFAYAAVFRLGIEL
VILQDMSFENVFKVLTAVIFGAMAVGQNSSFAPDFAEAKVSARRMFALFDQTPEIDAYSD
EGASPAHCKGEITLKAVHFRYPTRPDLPVLKGLDVTIKPGQTLALVGQSGCGKSTTVQLV
ERFYDAEEGQVLIDGVDVRKLNVKWLRQQMGLVSQEPMLFNQSIKENILYGDCARTPSDA
EIDEAAKNANIKNFIQDLPEKFDTMVGLKGGQLSGGQKQRVAIARALIRNPKILLLDEAT
SALDTESEKIVQDALDAARKGRTSVVVAHRLSTVKNADQIAVVDNGVVVEIGTHEQLIAA
KGPYFSLVNAQLSEKDRNGEDFLVKLK
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggacgtagatggcagtgaaacaataaagccagtagaagaaaacgtagtggaa
acttcgttctctcgtaccaaagacggaagcacgatgggctccgataatgggtcagatgga
aaaaaggaaaagaaagagaaagaggacgtacccaccgttccctactataaacttcttcgc
ttcgctactggcatcgattaccttctgatgaccataggaacattggcggctgttatacat
ggcgcaggtctacccgtcatgttcattttctttggccaacttaccactgagtttacaact
tatggtcgatacttacaatgccagctacaatataatatctgctacgcaatgaacttgaca
acactgaacgaatcggaatgggacacaacagtagctccgactttaaatggattcaaggac
gagtcattgaaatatgtctactacttcgtgtacatcgcgtgcgcggtccttttctttgcg
accatccaagtcggctgttggtctttggcgtcagtcagacagacgaagcggatcagggtc
gcttacttccgtgctattttgcggcaggatatgggatttcatgacgtcacttcatctggt
gaactaaacgtccgactatctgctgacgttaagaagatcaaagacgggattgatgaaaaa
gtttctcttacaacccagtacctcagcatgggattaagtggtctcataatcggcatcgtg
tacgcttggaaactggcgttggtgtcactggcagtctctccattactaggggtgtcatca
acgcttatgttcacgctcactgggatatacaccaagaaagaactagcagcatatgctaag
gctgggtcgatcgcagaagaagcgatatcagctgtgagaaccgtggtttctttcgggtgt
caacagaaggaagttgaaagatacgctgggaatcttggaagcgcaaaaatcgttggcatc
aagcgtggcttcgtgtctggctttagtattggacttctatacatgtcaatgttcggttta
tacggtttgtcgttctggtatggtaccacgttggtgttgagtggtgaaattactgtcgga
aacatgatgacaacgttcttcaacattctcattgcggcgtttgcacttggaacggctggc
agctatttcgagtcgttcgctggcgctaaggctgcaggtgcaagcatcttcagcgtgatt
gaccgcattccaactattgacatcttttctgacaaaggagaaaatcccaaccctgaagat
ggatccgtacaactgaaggacgttaaatttacctatccgtcacgtccagatacgcaggtt
ctgaagggagtatccttatctattgaacatggtaagacggttgcgcttgttgggcaaagt
ggatgcgggaaaagcacgatcattcaacttgtacaacgattttatgacgtacaggaaggt
tcagtcaccgttggcggaaaaaacgtgacggacgttaacgttcgaaaactgcgggaactt
atcggggtcgtcgctcaagagcctgtgctgttcgctactactattgctgagaatatccgc
tgggggcgcgaaggagtaactgacagggaaatcgagcaagcagcccgacaagcaaacgca
tacaacttcatcatgaagctacccaataaatttgaaacgttagttggcgaaagaggtggt
caaatgagcggaggacaaaagcagaggattgctatagctcgcgccatcgtacggaatccg
aaggttcttctgctggacgaagcaacgtccgctctcgatacaaaaagtgaatcgatcgtt
caacaagcactggaaaaagcatctgcaggtcgcactacagtggttgtggcacaccggttg
tcaaccatacgaagtgctgataaaatctttgcttttcacgagggattgctgaaagaagaa
ggaagtcatgaagaactcctcaagatcaaagacggagtttacagcaacctcattaacatg
caagcaggaagagaaaaggaggaggaaaacgaaaaactcccggatccagatgaactgatt
gaaacggatattcccgaagtccagttttcttccgacgcacaacaaagacgaagatcccgc
acgatgtccggctcatctgtatcgagtcttatgaacagaaggggttcaatgacgcttgcg
aagacttactcacaacgatccaacagcaaacaagtcaacggaattggacacgaagtcgag
agcaaagacgacgaagaggaagaggacatcccagatgttggatttggaagaattcttaag
ttgaaccagccagagtggtattacatggcaggtgggtgtgtgtttgctgcaattgctgga
gccgcagatccggtgaatgcgattttgttcgctgaggttcttaccatatttacgctgacc
gacgttgaagaacaaaaggcgaaagcagtcttgtacgctcttattttcgtgggtgttgga
gtcgtcacttttattgcttactgttgcgaggcgacccttttcgccaagtctggcatggaa
ctcacagttcgacttcgcatgatggctttccaggccatgatgagacaggacatcgcatac
tttgacgaccataaacacagcactggcgcactttgcacacgactttcaaccgacgcctca
agggtacaaggatgcactggtgttaggattggaaccgtgattaagaacttcagctcactt
ggtgtcgcacttggaatagcatttgcatatgggtggaaacttacattactgacaatggct
tttatcccattccttattctcggaggcttgctagaaatgcagctgcttatcggaaaagaa
gaaaaagaaaagcaagcttacgagggagcaggtcaagtagcaggtgaagccataaacaac
atacgtacagtggcctctctaaccaaagagaaaacgatttacgagctttacactgaacaa
cttgttggaccagtaaagaaagcgacccaaaaagtgctgctggttgggcttggctacgga
tactcccagtgcgtgctgtacttcgcatatgccgctgtgtttcgacttggaatcgaactc
gttattctgcaagatatgtcgttcgaaaatgtcttcaaggtattgacggctgttatattc
ggagctatggctgtgggtcagaatagctcgttcgctccagatttcgccgaagccaaagta
tctgctcgacgaatgtttgcactatttgatcaaactcctgagattgacgcttacagtgat
gaaggcgcttcaccggcacattgcaagggtgagatcactcttaaagcagttcacttccgc
tacccaaccagaccagacttaccggtgttgaaaggccttgacgtgacgatcaaacccggt
cagacgttggctttggttggccaatccggatgcggcaaatcgaccacagtgcagctggtg
gaaaggttttatgacgcagaagaagggcaagtgttgattgacggagttgatgtcaggaaa
cttaacgtgaaatggttacgacaacaaatgggactcgtttcacaggaacccatgcttttt
aaccagagcatcaaagaaaatattttgtatggcgactgtgcacgaacaccaagtgacgca
gaaatagacgaggcggctaaaaacgccaatatcaaaaactttatccaagatctgccggag
aaattcgatacgatggttggtttgaaaggcggccagttatctggtggtcagaagcagaga
gtggccattgcaagggcactcatccgtaacccgaagattcttctccttgacgaagccacg
tcagcgctagataccgaaagtgaaaaaatcgttcaagacgcgctagatgccgcacggaaa
ggtcgaaccagcgtcgtagttgcgcacagactctcaactgtgaaaaatgcggaccagatc
gctgtagtggacaatggtgtcgtggtagaaatcggcacacacgagcaacttattgcggcc
aagggcccatatttcagtttggtgaacgcccaactttccgaaaaagatcgtaacggtgaa
gattttctcgtgaaactcaagtga
DBGET
integrated database retrieval system
