Ciona intestinalis (yellow sea squirt): 100183941
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Entry
100183941 CDS
T01056
Name
(RefSeq) protein scribble homolog isoform X2
KO
K16175
protein scribble
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
LRR_4
PDZ_6
PDZ_2
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
100183941
NCBI-ProteinID:
XP_018672996
LinkDB
All DBs
Position
2:7383803..7428424
Genome browser
AA seq
2036 aa
AA seq
DB search
MSPARLWKCFPNFRCNRQIDCIDKRHSSLLVVPEDVLRYARTLEELLLDANQIKDLPKQF
FRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNISRNDIAELPENIKFCKSLEVLDISGN
PLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNLSKLQTMECRENLLQSIPYTLCSIGG
LEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESV
PETIGDLHSITDLTLSHNFIDALPESIGKLKTLSILKVDQNRISKLPSSIGDWPNITELM
LTENLLTELPASIGNLQKMTTLNVDRNQLEVLPPELGKCSSLNILSVRDNMLTYLPTELG
NATNLRVLNVSGNRLDCLPISLASLKLKALWLSENQSQPLLKFQTENRGGAGDVLTCFLL
PQQPTQSMVNLLNGSVATQDDLSSIGRQQKRITFHEDQLKDIEDEGQGVLQRHLTPHPKE
LKRQQQSEVIQRHRQQAQKEQEATKVADDEAENKERDVNNEDQPLLDESALTEASNVVQD
TIPPTYEEATEKSELLQHQEEQEEEEEGEYEEKEVRFGQGTEGSDQEDAPRSDRLHRKDT
PHYKRDMRITESDKPDSVVALLKKSSVKETGEGPGTELFMEQVELTINREGGGLGLSIAG
GKGSMPYAEDDEAIFISRVTPKGAAANAGVRQGDRLLAVGDVVLTDVEHSVAVEALKNSD
ELVCLLVERWSRRKLETDDSQKNGEERLEEPEEEEASPEVKKQTVSFAPEPEMKIQGETF
TTTLKRTDQGLGFSIAGGVGSTPFRPGDPGIFVSKVVEGGEADVEGQVQLGDKVLSINGC
DMTNARHDEAVRLLKQISPEVGITLILYREDIFYTQPPVPGRDQIEAVQVTSEDYNLNSN
NANPIAYVQDQSPALPPKVYKNLQQFESNEKYPTEEIHLVRGEGPLGLSIVGGRDHNSHP
FGISEPGIFVSKIQADGAAANSNLRIGDRILEVNDIDLMYASHDEGVNALLASGQSMRLL
VRHDPPPPEMAEIHLVRNPGEKLGISIRGGVKGHPGNPLDETDEGIFISKINPDGAAFRD
GRISVGQRILEVNGQSLLGCTHSEAVRTLRAIGDEANFLLCKGYDPSEVTVCGLQAGHPA
AVEASPGVIVNPLIMRSESSSSVDEDVTPEEMNIHHQESQMLKEQDAWEKEEIKKREQLK
RIRDVEEKENIQIEQPVTNGSHQEHEVSFTYPPPKSAPPVATKPSYKQLSNTPPSLVSYK
PQVPELQDSNDLEIETITSSMSPKHPNYDENEDHHISKKVELGSGAMAGLAKHSYRELSD
VPVRNVPVLPPDEEKPEPRRRRRSRQLSKGGEKTTEPPISPELSPPPISPKPKSRPAAMP
PPIPPKTRSQKPSITKERISDEPHKKASYRLYASLPRPKTESFVKEDDAEEEVLLPTDVG
AQSTSLLPNTLTPQPTKDPKTKPSLPRLNISQIPPPSSSDFPHRPTLSPRNPTSPQVRYS
WPQGPTPCSPSPPPSFRQNPTSLPSPHPDIVHEDLFFRKLQHTKLAAPPSFLPSDETQKK
KIPKSPSRSPKRFDYRQFAAVPDPITPLPPSENSSPQSVLSTEHGTQESRTPTVTLVATM
HDWHVPPESSLWHQTYNAKHDPNFATFFPDYRSLAALPEEKTVETLREVPPKSPFTIKPH
LSPPMTSPPQLKITDEDGSPLLPVRQRAVHFSSQDDDISYLLPKTFTPRSLSPSSALSSP
EIQAPPSSAPPVVDNKHVDRMSFRDRRKYFEQEIKHQADDTGSIGRRKKISLVSDQDLRT
IKQEEEKKYGTLSKEDIRKSMDIDEEDEEMIEDMADISTRVDPDASIVIEGKEYKVEKRP
QKLSARERLTPQFSVPVTASSEEDLIRSLEKDVKRASCIEDRDATPSALNERLKVTSPEV
KRDARGGHDLSPAERRALEAEKRKQWRQERMASLENDIAIYNTLKARRRSAQRSLSASSG
TESVTDSNGSADGCMRFKSLEADALQAQMVMTKEKMKGRRSEGSFNATDKQQPAMT
NT seq
6111 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagcaagattatggaaatgtttcccaaacttcagatgtaacagacaaatagac
tgtatcgataaaaggcacagcagtttattggtggtacctgaagatgtgttgcgatacgca
cgcacccttgaagaactattactggatgcaaatcagataaaagacttaccaaagcaattc
ttccgtctcgttaagctgagaaaattaggtcttagtgacaatgaactacagaagatcccg
gcagatattgctcagtttgtctacttggttgaccttaatatcagcaggaatgacattgct
gaactaccagagaatatcaagttttgcaaatccctcgaagttcttgacataagtggcaac
ccccttacaaagctgcctgatggtatttgccaacttgtatgcatgaaacatctcaatctc
aacgatatatcgctgatcagaatgccacaggacatcggaaacttatccaagctacaaacg
atggagtgtcgtgaaaatcttctccaatcaatcccgtataccttatgtagtattgggggg
ttggaacagctcgatctcggcaacaatgagcttgaaagtctcccagatagtttgagtgaa
ctaaccaacctccgagatttatggttagatgggaatcaccttacttcattacctgatagc
atagggaagcttcataacattgtgtgcatggacctgagtgagaataagttggagtcggtt
cctgaaaccattggcgatttacattcgatcaccgatcttaccttgtcacacaactttatt
gatgctctgccagagtctatagggaaattgaagacactgtcaatcctaaaagtcgatcag
aatcgcatctcgaagcttccgtcttctattggggattggccgaatataacggaactcatg
ctcactgagaaccttctcactgagctgcccgcttccattggcaacttgcaaaagatgacg
acgcttaacgtggatcggaaccagctggaagttctgccaccagagcttgggaaatgttca
agcctcaacattctatctgtgcgagacaacatgttaacctacctacccactgagctgggt
aacgcaactaacttgagggttctgaatgtgagtgggaaccgacttgattgtcttcctata
tctcttgcttctctcaagcttaaagctctgtggctttctgaaaatcaatcccagcctttg
ttgaaattccaaacagagaatcgcggaggtgcaggcgacgtattgacgtgttttcttctg
ccacaacaacctacacagagcatggttaatttgttgaacggcagtgttgccacacaagat
gatctaagcagcattggtagacaacagaagcgcatcactttccatgaggatcagcttaag
gatattgaagatgaagggcaaggagtcttgcaacgccatcttaccccacatcccaaagaa
cttaagagacagcaacaaagtgaagtcatccaacgacacagacaacaagctcagaaagaa
caagaagctacaaaagttgctgatgacgaagctgaaaacaaagaacgggacgtgaacaat
gaagatcaacccttgctggatgaaagtgcgttaactgaagcatcgaatgttgttcaagat
acaatccctccaacttatgaagaggcaacagagaagagtgaattgctccaacatcaggag
gagcaagaggaggaagaggagggagagtatgaggagaaagaggttcggttcggtcaagga
actgaaggatcggaccaggaagatgctccaagatcggatcgtctccatcgtaaagatacg
cctcattacaagcgggatatgaggatcacagaaagcgataaaccagactcggtcgttgct
ttgcttaaaaaatcctcagtaaaagagacaggagaaggcccgggaactgagctattcatg
gaacaagttgagctaaccatcaacagagagggtggtggacttggtttaagcatagctggc
ggtaagggttcgatgccgtatgctgaggatgatgaagccatttttatatcacgtgtaaca
cctaagggtgcggctgctaatgctggggttcggcaaggagatcgccttcttgcggttgga
gatgttgtattgactgatgtagaacactcagtagctgtggaagcactgaagaatagtgat
gaactggtgtgcttgcttgtggaaaggtggtcaaggcgtaagttggaaacagacgacagc
cagaaaaatggggaggaaagattggaggagcctgaagaggaggaagcttctcctgaggtg
aaaaagcaaaccgtgtcttttgccccggagccagaaatgaagattcaaggagagacattc
acaaccactttgaagcgtacagaccaggggttggggttctccattgctgggggtgtcggt
tcgaccccttttcggcccggtgaccccgggattttcgtgtcaaaggtcgtggaagggggc
gaggccgatgttgagggtcaggtccaacttggggacaaagttttatcgatcaatggttgt
gacatgacgaacgctaggcacgacgaagccgtcaggctgcttaaacaaatcagccccgaa
gtggggataacgttaatcttgtaccgtgaggatatattctacacccaaccccccgtgcct
ggtcgtgatcagattgaagccgtgcaagttacatcagaggattataaccttaactctaac
aatgcaaatcccattgcttatgtacaagatcagtcccctgcattgccaccaaaggtttat
aagaatctacaacagtttgaaagcaacgagaagtatccaactgaggagatacacttggta
aggggtgagggaccacttggcttgagcatcgttggtgggagagaccataatagtcatcca
tttggcatcagcgaacctggaatctttgtttctaagatccaggcagatggggcagcagcc
aacagtaatctacggattggagatcgcatattagaggtcaatgacattgatctgatgtat
gcttcacatgatgaaggggtgaatgcattacttgcaagtgggcaaagcatgagactcctt
gtgagacacgaccccccacctcctgaaatggcggaaatccacttggttcgcaatcctggt
gaaaagctgggtatcagtataagaggtggggtgaagggacacccaggcaaccccctagat
gaaactgatgagggaatttttatttccaagattaatcctgacggtgccgcattccgtgac
ggtcgcatctcggtaggccagcgaatcttggaggtaaacgggcagtcccttttgggctgt
acgcattccgaagcggtgcgtaccctgagagctatcggcgacgaggccaactttctgctt
tgcaaaggttacgacccatctgaagtaactgtatgcgggttgcaagccggccaccctgct
gctgttgaggcctcacctggcgtgattgtgaatcccctgatcatgagatcggagagcagc
tcttccgttgatgaggatgtaactccggaagagatgaacatccaccatcaagaaagccag
atgcttaaggagcaggatgcctgggagaaagaagaaataaagaaaagggagcaattaaag
agaataagagacgtggaggagaaagagaatattcaaattgagcaaccagttacaaatggc
agccaccaggagcatgaggtatcgttcacctatcccccaccaaagtcagccccccctgta
gcaacgaaaccttcatacaaacaactttcaaacacacccccttccttggtctcttataaa
ccacaggttcccgaactacaggacagtaatgacttggaaatagaaaccatcacctcaagc
atgtcacccaagcatccaaactatgatgagaatgaggatcatcatataagtaaaaaggtg
gagcttggcagtggagcaatggctgggttggcaaagcatagttaccgtgaattgagcgat
gtcccggtcaggaacgtacccgtcttgcccccagatgaggaaaaacctgaacctcgcaga
agaagacgcagtcgacagctttcaaaaggtggtgaaaaaaccactgagccccctataagc
ccagagctgtccccgcccccaatttccccgaaacccaagtcccgccccgccgccatgccc
cctcctataccccctaaaactcggagccagaaaccctcgatcaccaaggagagaatttct
gacgagccacacaagaaagcttcttatcgtctttacgcttcgctgcctcggcctaaaacc
gagtcgtttgttaaggaagatgatgcagaagaagaagttcttcttcccaccgatgttgga
gcacaaagcacaagtttactcccaaacacattaaccccacagcccaccaaagatcccaaa
acaaaaccatctctaccacgcttaaacatctcacaaattccaccccctagctcaagcgat
tttccccacagacccaccctatcccctcgtaacccaaccagcccccaggtccgatattca
tggccccaaggccccaccccatgtagcccatcacccccaccttcgttccgacaaaacccc
acctcccttccgtcaccccaccccgacattgtgcatgaggatctattcttccggaagttg
caacataccaagcttgcagctcctccatccttcctcccatcagatgaaacacaaaagaag
aagattccaaaatctccgtctagatctccgaaaagattcgattatcgtcaatttgctgct
gtccctgaccccatcaccccactaccccccagtgaaaattccagcccacaaagtgtctta
tccactgagcatggtacacaagaaagcagaacccccacagtcaccctcgttgccactatg
catgactggcatgttccacctgaatcttcattatggcaccaaacatacaacgccaagcat
gatccgaacttcgcaacatttttccctgactaccgttcccttgctgctcttcctgaagaa
aaaacagtggaaactttacgggaagttcctccaaagtctccttttacaataaaaccacat
ctgagtcctccgatgacttcccctcctcaacttaaaatcactgacgaggatggaagtccc
ctgctccctgtccggcagcgggcagtccacttttcctcacaagatgacgatatttcttac
ttactccccaaaacttttactccacgctctttatcgccctcttctgctctctcttcccca
gaaatccaggctccaccaagctcagcgcctccggtggtggataacaagcacgttgatcga
atgtcgttccgcgatcgaaggaaatatttcgagcaggagatcaagcaccaagcagatgac
acagggagcattgggaggaggaagaagatcagcctcgtcagcgatcaagatcttaggacc
attaagcaggaggaagagaagaaatatgggactttatccaaggaagacatccggaagtcg
atggatatagatgaggaagatgaggagatgatcgaagatatggccgacatctcgacaagg
gttgatcccgatgcttccattgttatagaggggaaagaatataaagtggaaaaacgacca
cagaaactgagcgcacgtgagcgactgactccacaattttcagttcccgttacagcaagt
agtgaggaggatctcatccgatcgttggagaaagatgtgaagagagcaagttgcattgaa
gatagagacgcaacaccaagtgctttgaacgagaggttaaaagtgacgtcacctgaggtc
aaacgagatgccaggggaggtcatgacctttcacctgcggaacgtcgagctttggaagcc
gagaaacgcaaacaatggagacaagaaaggatggcatcacttgaaaacgacattgcgatt
tacaatacgttaaaagcgcgacgtcgctctgcacagcggtcgcttagtgcctctagtggc
acagaatcagttaccgatagcaacggttcggcagacggctgtatgaggtttaaatcactg
gaggcggacgccttgcaagcacagatggtaatgaccaaggagaaaatgaaaggtcggcgg
agcgagggttcattcaacgcgactgacaaacaacagccagcgatgacctag
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integrated database retrieval system
