Ciona intestinalis (yellow sea squirt): 100185985
Help
Entry
100185985 CDS
T01056
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100185985
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100185985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
100185985
NCBI-ProteinID:
XP_002129292
Ensembl:
ENSCING00000013912
LinkDB
All DBs
Position
10:3569320..3593223
Genome browser
AA seq
543 aa
AA seq
DB search
MISGQSTCEWQTVQPQVNGHIDQAHQQQQLAAQGMVPPGIPIMLPHPMLTAQSASVPNWD
PNSTQAASASGTAPPSTVTTFVNNQSIPSTITSTYMNSSQSDTATYMQNSVKTEVGVTPS
PSVAPFVNQSMKEMPQLPQHPGMFPQAYLLPNGHTATAEFVQAQAAVAAAQGQAVAVGDG
SVPSTSSVGYSVTGQPIIMMDPNQVPNGGVPVTHVQTLALPAPNTSTGSGSSVTDEASSS
TKSDAVDPNKVTNQKRLHVSNIPFRFRDPDLRQMFGKHGKIADVEIIFNERGSKGFGFIT
FETKEDGDRAKKALHGTIVEGRKIEVNDATARVQTKKPATPLINGLKLPQMVAANLYDPM
AAAVQVNPLTAAAYRQTALARGRGRSLLVRQPALAAAPQMATAAIQTNGGLIPVMYDTSS
LYQPAPTGYDLSALTAAVQGGSVFYQPTAQGIPAGATAYTIPQYATTRYIQAAPASQGAT
AAQLQAGLAYTAAGAVPTAAAPQQLTYATPTAILDPYQQAALTPGAYGATLAHPARSYRF
TPY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgatttccggtcagtctacttgtgagtggcagaccgtacaacctcaagtaaacggccac
atcgaccaggcccaccagcaacaacagctagcagcacaaggaatggtaccacctggaatc
ccaatcatgttgcctcacccaatgctaacagcccaatcagcgtctgtccccaactgggat
cccaactcaacccaagcagcaagtgcgagcggcactgccccgccttcgaccgtcaccacc
tttgtcaataaccagtccatccccagcactatcacttcaacctacatgaattcaagtcag
tccgacaccgccacctacatgcagaactcagtcaaaactgaggtgggtgtcaccccgagc
cccagtgtggccccgtttgtgaaccagtcaatgaaagagatgccgcagttgccccaacac
cctggcatgtttccacaagcatatttgctgccaaacggtcacactgccacagctgaattc
gttcaagctcaagctgctgttgctgctgcgcagggtcaagctgttgcagtaggcgatggt
tctgtcccttccacgtcttcagttggttattcagtgaccggacaacccataatcatgatg
gaccccaaccaggtccccaatggtggggtaccggtcacccatgtacaaactcttgcccta
cctgctcctaatacctcaactggctcaggaagttctgtgactgacgaggcgtcctcatct
acaaagagcgatgctgtcgacccaaataaagtaaccaatcagaagcgtcttcacgtctca
aatattccgttccgattccgagatcctgacctgcgacaaatgtttgggaaacatggtaaa
attgcagacgtagaaattatttttaatgaacgtggctccaagggttttggtttcattacg
tttgaaacaaaggaggatggagacagagcaaagaaggctctgcatggcaccattgttgag
ggaagaaaaattgaggtaaatgacgctactgcaagagtccaaaccaagaagccagcaacc
ccacttataaatggtctaaagttgccgcaaatggttgccgcaaacctgtatgaccccatg
gcagcagcagtgcaagtcaacccactaacagcagcagcatacagacaaacagcacttgca
agaggcagaggaagaagtctcctagttcgacaaccagcgcttgcagcagctccacaaatg
gctacagctgcaatacaaaccaatggaggtctcataccggtaatgtacgacacaagcagc
ttgtaccaaccggctccaaccggttacgacctgtctgctctcactgctgcagttcaaggc
ggttctgtgttttatcaaccaactgcgcaaggtatcccagccggtgccacagcatatacc
atcccgcagtacgccactacacgttacatacaagctgctcctgcctcccaaggtgccacg
gccgcacaactgcaggctggtttggcatacactgcagctggtgccgtgccaactgcagcc
gcgccacaacaattgacctacgctaccccgaccgccattttggacccctaccaacaggct
gccctgacacctggggcttatggggcgaccttagcccaccctgcaagaagttatcggttc
acaccctactga
DBGET
integrated database retrieval system
