Clostridium intestinale: HZF06_18920
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Entry
HZF06_18920 CDS
T08934
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cint
Clostridium intestinale
Pathway
cint00521
Streptomycin biosynthesis
cint00523
Polyketide sugar unit biosynthesis
cint00541
O-Antigen nucleotide sugar biosynthesis
cint01100
Metabolic pathways
cint01110
Biosynthesis of secondary metabolites
cint01250
Biosynthesis of nucleotide sugars
Module
cint_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HZF06_18920 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HZF06_18920 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HZF06_18920 (rfbC)
Enzymes [BR:
cint01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HZF06_18920 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QLY82400
UniProt:
A0A7D7A6Z7
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All DBs
Position
complement(3806453..3807028)
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AA seq
191 aa
AA seq
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MIMFNFIETKIKDLYIIEPKVFGDNRGYFMETYNRNDFFEAGLTMEFVQDNESKSKKGVL
RGMHFQTKHTQGKLVRATRGSVYDVAVDLRKGSPTFGQWEGVLLTEENKRQFYVPEGFAH
GFLVVSDEAVFNYKCTDFYAPEYDSGLLWNDSEVGIEWPLDGIDELLLSEKDKAQKTLKE
LDLPFIYKGDK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ataattatgtttaattttattgaaacaaaaataaaagatttatatataatagagccaaaa
gtattcggagataatagaggatactttatggaaacttacaatagaaatgatttctttgaa
gctggattaactatggaatttgttcaagataatgaatcaaagtccaaaaaaggtgtactt
agaggaatgcattttcaaacaaaacatactcaaggaaaacttgttagagctactaggggg
tcagtctatgatgtagctgttgacttaagaaaaggttcaccaacctttggacaatgggaa
ggtgttcttttaacagaagaaaataaaagacaattttatgtaccagaaggatttgctcat
gggtttttagtagtttctgatgaagctgtatttaattataaatgtacagatttctatgca
ccagaatatgattctgggcttttgtggaatgattcagaggtaggaatagagtggccttta
gatggaatcgatgaacttttattatctgaaaaagataaagcgcagaaaacattaaaagaa
ttagatttaccgtttatatataagggggataaatag
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