Chryseobacterium indologenes: CEQ15_18500
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Entry
CEQ15_18500 CDS
T04932
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
cio
Chryseobacterium indologenes
Pathway
cio03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CEQ15_18500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cio03400
]
CEQ15_18500
DNA repair and recombination proteins [BR:
cio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CEQ15_18500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
DUF809
AAA_14
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ASE63331
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Position
4105963..4108551
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AA seq
862 aa
AA seq
DB search
MAKSKKETPLMTQYNTIKAKYPDALLLFRVGDFYETFGQDAVRTSQILGIVLTKRNNGEG
SVELAGFPHHSIDSYLPKLVRAGMRVAICDQLEDPKMVKGIVKRGVTELVTPGVTFNDQV
LNSKKNNFLLSLHKEKERYGIALVDISTGEFLVSEGNLEKLLHIVNTFDPSEIIFQRSTQ
LPEQIKNKNAFKLEDWAFQYNFAYEKLTNHFKTNSLKGFGVENQPLAITAAGAIFAYLVE
DTHHNLLAHITKLQIIPQEDYLMMDNFTLRNLEIVYPSNPQGKSLLDIIDKTSTPMGGRL
LRRRIILPLKSVDEIARRLSLIDFLNENDSLKYEICQLLKSISDLDRLMGKLAAEKISPK
ELGYLRQSLINIHKIKALLHPHADVLAWLDPLFDLDELIRFLQNHLKEELPVSLAKGNIV
KEGISEELDRLRNLQSKGRGFLDEMCQREIERTGISSLKIDFNNVFGYYIEVRNTHKDKV
PNDWVRKQTLVNAERYITEELKEYESQILGAEEKISVLESALYRDVCSEAMVYIDQIQGN
SNIIAQLDVAGGLSELAVSESYTRPVLNDGYAINLQEARHPIIENALPLGEKYIPNDIFL
DKDSQQIIMVTGPNMAGKSAILRQTAIVCLLAQIGSFVPAKHAEIGLLDKIFTRVGATDN
ISAGESTFMVEMNEAANILNNISERSLILLDEIGRGTSTYDGVSIAWAIAEYLHQHPTQA
KTLFATHYHELNEMTVNFERVKNFHVSIQENKGNIIFLRKLVPGGSEHSFGIHVAKLAGM
PAKVVNRANEILKTLEASRTQGGGTSENIKRVTEENMQLSFFQLDDPVLENIREELTKID
INTLTPIEALMKLNAIKKMIGG
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcgaagaaggaaactccgttaatgacgcagtataataccatcaaggcaaaa
taccctgatgcacttttacttttcagagtaggggatttttacgaaacttttgggcaggat
gccgtgaggacatctcagattctgggaattgttcttactaagagaaataatggggaaggg
agtgtagaacttgccggatttccacatcattccattgattcttatcttcctaaactggta
agagcaggaatgcgggtagccatctgtgatcagcttgaagatccgaaaatggttaaagga
attgtaaaaagaggagtaacggaactggtgacgccgggagtaacgttcaacgatcaggtt
cttaattcaaaaaagaacaactttttgttgtctttacataaagaaaaagaacgctatgga
attgccctggtcgatatttctactggagaatttctggtaagtgaaggaaacctggaaaaa
ttattacatattgtcaatacctttgatcccagtgaaattatcttccagcgaagtactcag
cttccggagcagattaaaaataaaaatgcctttaaacttgaagactgggcttttcagtat
aattttgcctacgaaaaattaaccaatcattttaaaaccaattctttaaaaggattcggt
gttgaaaatcagccactcgctattacggcagccggagctatttttgcctatctggtggaa
gatactcaccataatctgcttgcccatattacaaaattgcagatcattccccaggaagat
tatctgatgatggataactttacattgaggaatctggaaattgtttacccaagtaatccg
caaggaaaatctttattggatattattgataagacttctactccaatgggaggaagattg
ttgagaaggagaatcattcttcctttaaaatcagtagatgaaattgccaggagattatcc
ctgatcgactttttaaatgaaaacgacagcctgaaatatgaaatctgccagctgctgaaa
tcaatctctgacctggacaggttaatgggaaaactggccgctgaaaaaatttctccgaaa
gaactgggatatctccgtcaaagtttaattaatattcataaaatcaaagccttgctacat
cctcacgctgacgtactggcgtggcttgatcctttgtttgacctggatgagttaatcaga
tttttgcagaaccatctgaaggaagagcttccggtgagcctggctaaaggaaatatcgtc
aaggaagggatttctgaagaacttgacaggcttagaaatcttcagagtaaaggacgtggc
ttcctggacgaaatgtgccagagagagatagaaagaacagggatttccagccttaaaatt
gattttaataacgttttcggatattatattgaagtacgaaatacccacaaagataaagtt
ccgaatgattgggtaagaaagcagacacttgtcaatgctgaaagatacattactgaagaa
ttaaaagaatatgaaagccagattcttggagcggaagagaaaataagcgtcctggagagt
gcattgtacagagatgtttgttcagaagcaatggtttacatagaccagatccagggtaac
tccaatattattgcccagttggatgttgccggaggattgtctgaacttgctgtttctgag
agctatacaaggcctgttctgaatgacgggtatgcgatcaatttacaggaagcaagacat
ccgataattgaaaatgcacttccattaggagaaaaatatattcctaatgacatcttcctc
gataaagattcacaacagatcattatggtcaccgggccaaacatggccggtaagtctgct
attctacgccagacagccattgtatgtcttttggctcagattggaagctttgtaccagca
aaacatgcagaaataggtttgctggataaaatatttaccagagtgggggctaccgataat
atttctgcaggagaatctacttttatggtagagatgaacgaagcagccaatatcctgaat
aatatttcggagcgaagcctgattttattggatgaaatcggacgtggaacttcaacgtac
gacggtgtttccattgcgtgggccattgcggaatatcttcatcagcatcccacacaggca
aaaaccttatttgctacacactatcacgaactaaatgaaatgacagtgaattttgaaaga
gtgaaaaactttcacgtgtctattcaggaaaacaaagggaatattattttccttcgaaaa
ctggttccgggtggcagtgagcacagctttgggatccatgtcgccaaattggcaggaatg
ccggcgaaggtcgtaaacagagctaatgaaatcctaaaaacccttgaagcgagcagaacg
cagggaggcgggacttcagaaaatattaaacgcgtaacggaagaaaatatgcagctttct
ttcttccagctggatgatcctgttttagagaacatccgggaggagctgaccaaaatcgat
attaatacgttgacaccgattgaagctttaatgaagctgaatgcaataaaaaaaatgatt
ggaggctag
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