Citrobacter sp. CFNIH10: C2U53_24250
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Entry
C2U53_24250 CDS
T05324
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
cir
Citrobacter sp. CFNIH10
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cir03009
]
C2U53_24250
Enzymes [BR:
cir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
C2U53_24250
Ribosome biogenesis [BR:
cir03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
C2U53_24250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
FtsJ
PCMT
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
AUZ66696
UniProt:
A0A3Q8DB95
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Position
4210662..4212203
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AA seq
513 aa
AA seq
DB search
MGHRAATLISGSGVLAPEPLCYTARLFFCRWYSPVTQHAVYFPDAFLTQMREAMPAHLSF
DDFLAACQRPLRRSIRVNTLKISVADFLTLTAPYGWSLTPVPWCEEGFWIEREDEDALPL
GSTAEHLSGLFYIQEASSMLPVAALFADDNSPKRVMDVAAAPGSKTTQIAARMGNQGAIL
ANEYSASRVKVLHANISRCGISNVALTHFDGRVFGAALPEMFDAILLDAPCSGEGVVRKD
PDALKNWSVESNLEIAATQRELIESAFHALRPGGTLVYSTCTLNREENESVLAWLKETWP
EAVEFLPLGDLFPEANQALTAEGFLHVFPQIYDCEGFFVARLRKTASIPALPAPKYKVGN
FPFTPVKGREAANLTQAANALSLHWGENLRLWQRDKEVWLFPAEIEPLIGKVRFSRLGIK
LAETHNKGYRWQHEAVIALADVNHRCAFELSQQEAEEWYRGRDVYPQTVPATDDVLVTFQ
HQPIGLVKRIGSRLKNSYPRELVRDGKLFTGNV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggggcaccgcgctgccacgttaatatccggctccggcgtgctcgcgccggagccttta
tgctacactgcgcgcttgtttttctgccggtggtactcccccgtgactcaacacgctgtt
tattttcctgacgcctttttaacgcaaatgcgcgaggcaatgcctgcgcacctctctttt
gacgattttctcgccgcttgccagcgcccattacgccgcagcatccgcgtgaatacgctt
aagatttctgtggccgattttctcaccttaaccgccccgtatggctggtcgttgacgccc
gttccctggtgcgaagaaggtttctggattgagcgtgaggatgaagatgcgctgccgctc
ggcagtaccgccgagcatctgagcggtctgttttatattcaggaagccagttccatgttg
ccggttgccgccctgtttgccgacgataattcccccaaacgcgtgatggacgttgctgcc
gcgcctggctcaaaaaccacgcaaatcgctgcgcgcatgggtaatcagggtgcgatcctc
gcgaacgaatactcagccagtcgggtgaaagtgctgcatgccaatatcagtcgctgtggg
atcagtaacgtggcactgacccattttgacggccgcgtatttggtgcagcgctgccggaa
atgttcgatgcgattttgcttgatgcaccttgctcgggtgaaggtgtggtgcgtaaggat
ccggatgcgctaaaaaactggtccgttgagagcaatcttgagattgccgcaacccagcgc
gaactgatcgaaagtgcgtttcacgccctgcgccctggcggtacgctggtctattcaacc
tgtacgttgaatcgtgaagaaaacgagtcggtgctggcctggctgaaagagacctggccg
gaggcagtggaatttttaccgttgggcgatctttttcctgaggcgaatcaggcgctgacg
gcagaaggtttcttgcatgtgttcccgcagatttatgactgcgaaggattcttcgtcgcc
cgcctgcgtaaaacggcctccattcccgcactgccagcaccgaagtacaaagtgggcaac
ttccccttcacccccgtcaaaggtcgcgaagccgcgaatctgacccaggcagctaatgcc
ctcagtctgcactggggcgaaaacctgcgcctctggcagcgtgataaagaggtctggctt
ttcccggcggagatagaaccgctgatcggcaaagtccgtttctcccggctcggcattaag
ctggctgaaacgcataataaaggttatcgctggcagcacgaagcggtcatcgcgctggct
gatgtcaatcatcgctgtgcgtttgaactgtctcagcaggaagccgaagagtggtatcgc
ggtcgcgatgtctacccgcagaccgtccccgccactgacgatgtgctggtgaccttccag
catcagccgattggccttgtcaaacggatcggctcgcgcctgaaaaacagttacccgcgt
gaactggttcgtgatggcaaattgtttaccggtaatgtctga
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