Citrobacter sp. CFNIH10: C2U53_26915
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Entry
C2U53_26915 CDS
T05324
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
cir
Citrobacter sp. CFNIH10
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cir03400
]
C2U53_26915
DNA repair and recombination proteins [BR:
cir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
C2U53_26915
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
AAA_16
UPF0547
SLFN-g3_helicase
zf-tcix
zinc_ribbon_2
AAA_22
AAA
zf-ribbon_3
DZR
Motif
Other DBs
NCBI-ProteinID:
AUZ67165
UniProt:
A0A3Q8DC00
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All DBs
Position
4683329..4685089
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AA seq
586 aa
AA seq
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MIFTLRPYQQEAVDATLNHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQSEFSLLIVDECH
RIGDDEESQYQQILTHLSNANPHIRLLGLTATPFRLGKGWIYHFHYHGMVRGDDKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRLTPH
IISQIIEFAQTRKGVMIFAATVEHAKEIAGLLPKADSALITGDTPGPERDELIDAFKAQR
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYSPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLLEHFGRRCQGWFEDDEG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTILVDPDDMLKAALKLKDALVLRCSGMT
LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGVPLRWITA
ADILAQQPLLRHPDFVVARMKGLYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacacttcgcccctaccagcaagaagccgtggatgccacgctcaaccatttc
cgtcgccatcgcacgcctgcggtgattgttctgcccactggcgccggtaaaagcctggtg
attgctgaactggcgcgcgtcgccagaggccgcgtgctggttctggcgcatgtgaaagag
ctggtggcgcaaaaccatgccaaatactgcgcactggggctggaagccgatatttttgcc
gccggacttaaacgtaaagagagccacggtaaagtggtgttcggcagcgttcagtccgtg
gctcgcaatctggacgccttccagagcgagttttcgctgctgattgttgatgaatgccat
cgtatcggcgatgacgaagagagccagtatcaacagatactcacccatctgagcaacgcc
aatccccacattcgcctgctggggctgaccgccaccccttttcgtctgggcaaaggctgg
atctatcattttcactaccacggtatggtgcgcggcgacgacaaggcgctgtttcgcgac
tgcatttacgaactgccgctgcgctacatgattaagcacggctatcttacgccgccggaa
cgcctcgacatgccggtggtgcagtacgatttcagccgcctgcaggcgcaaagcaacggt
ctgtttagcgaagccgatctgaatcgtgagctgaaaaagcagcagcgtctcacaccgcat
atcatcagccagattattgaattcgcccagacccgcaaaggggtgatgatttttgccgcc
accgtcgagcatgccaaagagattgccggactgctgccgaaagcggattccgcgctgatt
accggcgacacgccgggtcctgaacgtgatgagctgatagacgcgtttaaggctcagcgt
tttcgttatctggtcaacgtctccgtcttaaccacgggcttcgatgccccgcacgtcgat
ctcattgccattctgcgccccaccgagtcagtcagtctgtaccaacaaattgtgggtcgc
ggcctgcgtctcgcaccgggaaaaacggactgtttgattctggattacgccggtaatccg
cacgatctctattctccggaggtggggagcccgaaaggcaaaagtgataacgtgccggtc
caggtcttctgcccggcctgcggtttcgcaaataccttctggggcaaaaccaccgctgac
ggtacgctgctcgaacattttggccgccgctgtcagggttggtttgaagatgatgaagga
catcgcgagcagtgcgattttcgcttccgctttaaaaattgcccgcagtgcaacgccgaa
aacgacattgccgctcgccgctgtcgggaatgcgatacgatccttgtcgatcccgacgac
atgctgaaagcagcgttgaaactgaaagacgcgctggtgctccgctgtagcggcatgacg
ttgcagcacggccatgacgagaaaggcgaatggctgaaaatcacctactatgacgaagat
ggcgcggacgttagcgagcgctttcgcctgcaaacccctgcccaacgtacggcatttgaa
caactgtttatccgcccgcatacccgcacgccaggtgtgccgctacgctggatcaccgcg
gcggatatcctcgcgcaacaacccttgttacgccatcccgactttgtggtggcgcggatg
aaaggcctgtactggcaggtgcgggaaaaggtattcgattacgaggggcgtttccgtcgg
gcacatgaattacgcggttaa
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