Citrus sinensis (Valencia orange): 102609479
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Entry
102609479 CDS
T02983
Name
(RefSeq) RGG repeats nuclear RNA binding protein A isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102609479
Spliceosome [BR:
cit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102609479
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Spore_III_AF
Motif
Other DBs
NCBI-GeneID:
102609479
NCBI-ProteinID:
XP_006477112
LinkDB
All DBs
Position
3:complement(join(4960493..4960672,4961251..4961307,4961389..4961550,4962734..4962863,4962980..4963045,4963154..4963463,4964212..4964401))
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AA seq
364 aa
AA seq
DB search
MTTVNPFDLLGDNDFEDPSQLVVAGVAKLAEKPKKSAPAQAQPASKPAPAAKFPNKPPPP
AQAVREARNEGGRGGGRGGGRGFGRGGGRGFDRDSGNNNTFGGNNGLSGGYRPSEEGEGG
NLSERRGYGAPRGSFRGGRRGGFNDGESKEGERPRRVFERRSGTGRGNEIKRDGAGRGNW
GTPTDEIAQETEEPVAETENTNAEKPSGEENAADANKENPVDEQEEKEPEEKEMTLEEYE
KVLEEKRKALLALKTAEERKVDVDEEFKSMQPLSNKKSNDDVFIKVGSEKDKRKDAADKE
EKAKKSVSINEFLKPAEGERYFNPSGRGRGRGRGSRGGYGGSTSSSAAAPKIEDPGQFPS
LGGK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgtcaacccctttgatctactgggtgacaatgattttgaagacccaagtcaa
ctcgtcgttgctggagtggcgaagctcgccgagaagccgaagaaatcggctccggctcaa
gctcagcctgcatccaagccggctccggccgctaagttccccaacaagccgcctcctccc
gctcaagctgtgagggaggctaggaatgaaggtggacgtgggggaggccgcggtggtgga
cgtggctttggacgtggagggggccgtggctttgatcgtgattcaggcaataataacacg
ttcggtggcaacaatgggctttctggaggatataggccttccgaagagggagaaggaggg
aatctctcagaaagacgtgggtatggggcaccccgtggttctttccgtggtggtcgccga
ggtggttttaacgatggagaatctaaagagggagaacgtccacgtagggtatttgaacgc
cgcagtggaacagggcgtgggaatgagattaaacgtgatggggctggtcgtggtaattgg
ggaactccaactgatgaaattgctcaggagactgaagaacctgttgctgaaactgagaac
acaaatgctgagaagccttctggagaggaaaatgctgcagatgccaacaaggagaatcct
gtggatgagcaagaagagaaggagcctgaggagaaggagatgaccctggaggagtatgaa
aaggtacttgaagagaagaggaaagctttgcttgccctaaagactgctgaggaaaggaag
gttgacgtggacgaagagttcaagtccatgcaaccactttcaaataagaagagcaatgat
gatgtttttatcaaagtgggatctgaaaaggacaaacgcaaagatgctgctgataaggaa
gagaaagccaagaagtctgttagcataaacgagttcttgaagcctgctgaaggagagagg
tactttaacccaagcggtcgtggacgtggacgtggccgtggttcaaggggtggatatggt
ggtagcacgtccagcagtgcagcagctcctaaaattgaagaccctggacaattcccctcc
ttgggtggcaagtga
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